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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38555_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_YTHDC2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0008186 F ATP-dependent activity, acting on RNA
GO:0016787 F hydrolase activity
GO:0034612 P response to tumor necrosis factor
GO:0044822 F RNA binding
GO:0044829 P positive regulation by host of viral genome replication
GO:0070063 F RNA polymerase binding
GO:0070555 P response to interleukin-1
GO:1990247 F N6-methyladenosine-containing RNA binding
Transcript
Level		FPKM:8.98 TPM:8.70
ORF EntryO_SariASG15754_3prime_partial:A_SariASG_c38555_g1_i1
Sequence
(Nucleotide)
TCCATCTCTGCGATATTATAAAAAGATTATTTTCTCTATTCCTGATATTTGTTCAAATTG
GGGTCTATAAACACATTCTCTTGATAATATGCAAGTAAGAATATAATAAATAATCAAAAT
GAGTTCGAAAAAAGGGAAAAGGAATTTGGGCAACAAGCATTTTCCCATAGCAGAGTCTGT
GAGCATAGCCCTGAAAATACAGCTGGACAGATTTATCAGCGACGAAAATGAAACGGAGCT
AAAATTTCCGTCATTTCTATCAGCACAGGAACGCGGCTTTATTCATGAAACAGTGGCTAA
ATTAGGTTTAAAGTCTAAATCTCGTGGGAAAGGTGTTAACCGTTTCATAACAATATACAA
AAGACTCGGATCCACAATAATTCAAAGTGATGCAAAACTTATTCTGGATTCTAATATGCG
GTGCAGTATTGCAGAATTGTCTAATGCATTCCCTATTACTAATAAAGAAAAAGATGACCT
AAGCAGCTGCCCTGAAAAAGAGAGAAGCCCTCAGTTGACTCATAAGTCATTAGGCCAATT
GAATAATGGAGTCGCTCAGATACCAAACTCCACATACAATCCAGATCTATTCAAGTTCAG
AGATAAGCTGCCCGTGTATGAGCAAAGACAGGATCTCATTAATGCTTTAGCCCAAAACCA
GGTGATTATAGTAGCAGGTGCTACTGGGTGCGGGAAGACAACTCAACTGCCGCAGATAGT
CCTAGACTACTGCCAGGAACATAAACAACCGGCAGATCGG
(760 bp)

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