SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38549_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106118608_isoform_X4_[Papilio_xuthus]
Ontology
GO:0001726 C ruffle
GO:0002230 P positive regulation of defense response to virus by host
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006928 P movement of cell or subcellular component
GO:0007009 P plasma membrane organization
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0015629 C actin cytoskeleton
GO:0030035 P microspike assembly
GO:0030036 P actin cytoskeleton organization
GO:0030139 C endocytic vesicle
GO:0042802 F identical protein binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0061333 P renal tubule morphogenesis
GO:0071498 P cellular response to fluid shear stress
GO:0072102 P glomerulus morphogenesis
GO:0072160 P nephron tubule epithelial cell differentiation
GO:0098792 P xenophagy
GO:2001013 P epithelial cell proliferation involved in renal tubule morphogenesis
Transcript
Level		FPKM:2.88 TPM:2.79
ORF EntryO_SariASG15746_complete:A_SariASG_c38549_g1_i3
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTCTACAGAGAAGGATTGTTCGCCGCTATGGAATCTTTACCAGCAG
ATAGTGTCAGATATGAAGAACAGCGCCCCTATATGGGAGGAGTTTATATCAAAGGCAACG
AAGCTTCACACAGCATTAAAATCAGCTTTGGTTGCGATTGCTGCGTTTCTGGATGCATTC
CAGAAGATCGCAGACGCTGCGACTAGTGCCAGAGGAGCGACAAAGGAAATCGGCACTGCA
TTAACGAGGGTGTGTCTTCGTCATCGCGCTATCGAGACCAGAATGAAGACTTTCATTAGT
ACATTAATGGAGACGCTGGTGAGCCCATTAGCGGAGAAGGCTGAAGAGTGGCGACGCGGT
GGATGCGCTACCGGCGCCCTCAGTAGGGAGCACGCGAGAGATTGTAAGCGAGCTCGCGCC
GAACTACGCCGTCGGATGACGGACGCACAGCGGCACGCAAGGAAGGCAAGGCGTGCCCCG
CCCGACGCCAAACGAAGGGCTGACGTCTGCATGCAGGACGTGCAGGAACGGAAGCAGCAG
CTAGAGGAGATGGAAGAGAAAGCGGTCAAAGCGGCACTTATCGAAGAAAGGAGTCGCTTC
TGTCACTTCGTTTCGCTTCTCAACCCAGTTGTCGAGAGTGAAGTGGCAATGCTAGCGGAA
GTGGGACACCTGCAGGAGGGCACCGAACAACTATTACGACACATCACCGAACCTAGAACT
TTGCCAGCAGCCAGTTTACAGGTGGTTTGCGACATAAAGTCGTGCTCCGGCGCTTGGGAG
TGTAACTCTGCGCCTCACTCTCCCTCCGCGTCTGGATCCTCCCGGCTCGGCAGCCGCAAG
TCTTCGCTCACGTCCATATCTTCACTGAACAGCCAATGTTCGGATCAACACCATGGCGGA
CCCGGTACAGCGGTTAGCTGCTCGACTCCGGTGTCGAACGGCTCGTCGACGGTTGCGCAC
GCGCATAACAGCGAGCACTGTCTCACGCAGCCTGCGCTGCGGCTGTCGAGCGTCTGCAGT
GCCGACTCCGGTTTCCGTTCCCAGGACGCTTTGCAGCGACGTTCGCTCTACGTTGACAAT
GGTTCAGACAATCAGAGCGTTAGCAGCGAATGCATTGTACCCGCTAAGGGTAATGCCGAT
GACGAACAAACAGACGACGTTTCGCACGACGGCCTGGGGAATGCCGCATCAGCAACATGG
CCTGATCTCAAAGATACTGCTCAATTCGAGAGGGCAGCGACTGCTATAATGGGGGGGAGA
CCTCACACCATCTCAGCTGGTTATGAGCGTGCGCACCCGCGCGCCGCGCTTAGTGTTCAC
ACGTTCAGCGAACACGAGACGCAGCGCGACTCCAGTATCTACTCACGTCCACCTTTACCT
ACGAGATGTTCTTCGTTGGAACGTCCCTCAGTACCGGCAAAGTCTAGCAACGCTAACAGC
GGACAGCAAGAATTCAAGACTAGCAAACCGTCTTCACTCCCACCACACCTTACTAAAGAA
TTGGGTGGTGCATTGTACGTGAATATGTCGGAACTAGCTTCGCTAGCGGCTAGTCGTGCG
CTGCAGCATCACGCGCCCGCCGATACCACGCACCACGAGAAGGTGTGTTCAGAGAGTAGC
GCCAGTGAATCATCATTGGAGTCTTCAAGCGGTTATGGAAGTCAGGGTGCCTTCGCGGCC
GAAGACCATGCACTCCAGCATCAAGCACAACACGCTGACGTCGATTCCGAGATCGTGATA
CTGCGTCGCGAAACCGAGGAAACTATAGCGGCGGCGCGTGAGAGTTTTTCCATATCGCTC
GGGAGTCTCGAGGAGGCTGTCCGTTCGTTGGACGAGGCGAGTGAATCGCCGCCAACGTTC
GCGACGATTGGCAAAAAGCCAGCGGTACCCAAACGCCGGCCGGTCTCTATGACGGCTGCT
GTGTGGTCTCGCCGAGGTTCATCCAGCTCGCTGGGCAAACCCCCGCCGCCCGTGCGACGT
TCCTCATCTATATCAAGACCACAGCGACCGCCATATATACAGGGTAACGCTCAGAACGCC
CCGGGTGGTGCCACAGATACTGATAACCTTCCGCCACCGCCAGCGTTCCTATTGCAACCG
GATACCGAGACAAACCCGGGTCATCAAACGATTAACGTAGCAGAGACAGTGAAACAACTG
ACCGAGTTGAAGCACACGCCGGCGTCGCCCGGTCTCGTCCGGCGCACAGTGCAGCAGCTG
TCGACCCCCAACGCGACCCCCCACGCGACCCCCCACCAGCC
(2261 bp)

- SilkBase 1999-2023 -