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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38533_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		mothers_against_decapentaplegic_homolog_6_[Helicoverpa_armigera]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001657 P ureteric bud development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005768 C endosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006955 P immune response
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008285 P negative regulation of cell population proliferation
GO:0010693 P negative regulation of alkaline phosphatase activity
GO:0010991 P negative regulation of SMAD protein complex assembly
GO:0030509 P BMP signaling pathway
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0030617 F obsolete transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity
GO:0031589 P cell-substrate adhesion
GO:0031625 F ubiquitin protein ligase binding
GO:0032331 P negative regulation of chondrocyte differentiation
GO:0034616 P response to laminar fluid shear stress
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035556 P intracellular signal transduction
GO:0035904 P aorta development
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0044212 F transcription cis-regulatory region binding
GO:0045444 P fat cell differentiation
GO:0046872 F metal ion binding
GO:0050767 P regulation of neurogenesis
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
GO:0060976 P coronary vasculature development
GO:0070410 F co-SMAD binding
GO:0070411 F I-SMAD binding
GO:0070412 F R-SMAD binding
GO:0070698 F type I activin receptor binding
GO:1902832 P negative regulation of cell proliferation in dorsal spinal cord
GO:1902844 P positive regulation of spinal cord association neuron differentiation by negative regulation of canonical Wnt signaling pathway
GO:1902879 P obsolete negative regulation of BMP signaling pathway involved in spinal cord association neuron specification
Transcript
Level		FPKM:5.53 TPM:5.36
ORF EntryO_SariASG15718_5prime_partial:A_SariASG_c38533_g1_i2
Sequence
(Nucleotide)
CCCGACGATCAGCTGCGGCGGCTGGCGCGCGCGCTTGACGCGGGCGCCGCCGGCGGCGAG
TGCGTGCCCGCGACGCGCGGTCAGCCCAACCTCAGGCTCGCCGTCACCCGCGCCTTCAGG
TTCCCGGACCTGCGCGACCTCACCGAGCTACGCCGCCTGCCGCTCTGTCCAGATCAGCTC
TGCTGCAACCCTTACCACTGGAGCCGCATCTGCAAACCCGAAACCCCTCCACCGCCCTAC
AGTCGCTTTGCCATGGACGACCTCAAACCTAAAGAACATGGTGAAAGTACGGAAGACGCG
AGAAGGACTAATCATGAACGGCTTAGTGCTGGTTCCCTGGCTACTGACGGTGAAGAACGT
CAGAGCTGGGAATCGGAATGGTGCAGACTGGCATACTGGGAGCTGACGCAGCGCGTCGGC
CGCCAGTTCGGAGTCAGGATGCGAGCTGTCGATGTCTTCGGTGGCGGGGGAGGAGCCTGC
GGCTCTGGGAGGCACGGTTTATGTCTAGACGCGTTAGACCAGCGGCAGGACGTACCGCAA
GCTGAACAGGTGCGTAAAACCCGCGCGAAAATCGGGCTTGGTGTAACATTATCGCTCGAA
TCAGACGGCGTGTGGCTTTACAATCGGAGCCAGGAGCCGGTGTTTGTTAGCTCGCCCGCA
CTGGACGCGGCGGCCGCGAAAGCTCTGCTCGTGTGGCGAGTGGCCCCGGGCCATTGCCTC
TGTATCTTCGATCCCGCGTGTCCTCCGCCTGCGGTTTCCCTCCCGCATATTGGCCCAGTT
GACCCCAGGTCTGTGAGGATATCGTTCGCGAAGGGCTGGGGACCGAAGTACTCGCGCCGG
GATGTGACCGCCTGTCCCTGTTGGCTCGAGGTACTCTTAGCGCCTCCGAGCTGACGTTAA
TGGAGTGTGATGATATTCTGTATTTGTTTCAGATGTTTCGGCTTGAAGTTTATTTTACTT
AGTGTTTTTGTGTTAACAGACCACTCATGGCCTTTGATATTGGACATGGAAAACCTGTAC
CAATTATCTAATTTCTGTTTTTGGAAATAAAATTTTCACAATACTTTTCCGAATATTCTC
TACCACCATTAATTTGCATATATAAATAAAACTAGGTAAACATGCTTCGAGCCGAAACAC
CTGGACAATTCTCAAAGGACTCTAAATAAAATGAAAATGGATAACGGACCATTGAAAGTG
CAAGTGCAAAGAGATCGGAA
(1220 bp)

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