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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38441_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_UBR5_[Danaus_plexippus_plexippus]
Ontology
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
Transcript
Level		FPKM:4.23 TPM:4.10
ORF EntryO_SariASG15489_complete:A_SariASG_c38441_g1_i3
Sequence
(Nucleotide)
GTGTGCTCTTCCGATCTGTAAGCTAAAACGCACATCGCCTACCGCTTATTGTGATTGCTG
GGAAAAGTGCCGTTGCAAAGCACTTGTGGGTGGGAATTGGGCCGCTAGGTGTGACCTGCT
AGCCAGACTAGCGAGGGATACTCAACTTGCTACACATTTTAATTCGAGAGGCGAATCGAT
ACTTCTATTCCTGGTGCAAACAGTCGGCCGTCAGGCTGTGGAACAGCGACAGTTCCGTGC
GGGCGGTGTCCGCGGTAGAGGTCCACGTAAACAGCCCGGCTCCGACGCCGAAGTCGATGC
TCCTGACCACGATCTAGAGCCGCCGAGGTTCGCTCGTCAGGCGCTATTGCATTTACTAGG
CGACTGGGCCGCCGTTGAAGCGGCGGTGATGTGCGGGGCGCAACCGGCGACGGTCGAGAC
GGAAAACCAGTCGGCCAATTCATCGAATCCTCAATCTGGAACGACTTTGCTTGATAAATT
CACTCATGCGCTTATTGTTAAATGTACTAATGAGATGTTAGATACATTGCTGCAGACGTT
GGACCGTGAGCAACAGAATCTCACGATACGAGGTCGCGCGGAACGCGCACGCGACGTCGC
GCGTCGGTTCGTACGGTCCGTTGCAAGAATATTCGTTATATTTAGCGTTGAAATGGCACC
AGGAGCTGCTAAAAAGAAAGGACCGCTGTCTATAACATCATCACTGGTCCGTTGTCGTCG
CGTGTTTGCTGCATTAGTGGTTCTATCTGTAGAGGAACTAATTGAAGCGGCTGACGCTCT
GTTAGCTCCGGTCAGACTTGGCGTCGTCAGACCTACAGCACCGTTCCCGTTGGCGACCAC
CTATGTGGACTTAGTGAATGGTAGCGAAGACTTGTTTGGCGTGGAACCGCTTTCTACTGG
ACATTCACGTCTACCGCATACACGCAGGGAATCAAATGCGGGCGGTAGTCGTGGCGCGAC
AGCGAGCGGTGCAATGATGGGAAGTTCCACATTGATGGCAGACCGGTCATCGACTCCGGT
CGCGACCGAGTACGCTGATGACGTAGCCGGTGAAGCGCTAGGTGGAGATGACGACGCCTC
TGAGACGGACGAACCTAATGTACCAGCGCCCGTTCCGCCCGCCGATACGCAGCATCACGA
TGACTCTATGGCCGACAGGGGACAAGAGCAACACGTGGTCGTAGAAAACGGAACAGAGCG
TGCCGAAGGTGGTGAAAGCGAGAGTGAACTCGATTTACTTGCTGAAGTGGAAACAGAGAG
CGACTCGGATGACCAGGACAATGCAGAGTCGGCTCAGCGCAGTGTACAGACCGGCGCTAC
ACAAGGGTCCGATGCCGCAATGGCTTCATTACTTCTGTATCCGGAAGATGAAAGTGGTGA
TTCGACGCAACCCGAAGACGAGGACTCTGAAGCGGGCGAGACCGATGAACAGGATGCTGA
GCCTGACCCCCCAATACACGACACGGATACACACGAACGGCGCGCTGTACCACAGGCCCG
ACCGACACTCGCGCCTCACTCCATGCAGTGGGCTATACGATCTCGCGAGACGGCCCGCGG
CACCAACAACAGTAACACGGGCGGAGTACGACTGACTGGTGGCTCGTCACTAGTGTTCAT
AGATCCTACGTCATTGCGTCGCTCTGCGGTGACTACAGCGGGCGCGCACGATCCCCATTC
CACTTCAACCACTTCCGTCTGTCTCGCTCGCGCTTTTGGTATCGTAATACGTCAAATCGC
CGATCTCCTGTGGGAATATGAACGCAGTACTTTGCCTTTGCCGCGCATGGTGCCTTTGGC
TTATCGCGACGCGTTGCGTTTACAATGTTATTTTGAGATACAATTAAAAGCGACGTGGGA
TTGGCTTGTAACTGTCATGGACGCTACTGAAGCTCAACTAAGATTTGGCGCTTCCTTAAC
TACAAACAATGGTAGTAGTACCTCCAACAGCGATGGGGGAAGGTCGAACGCGCCTACAGC
ACGACGTACTGCTTCACTAGCTTTGCCGGCGACTCGTATCATTGGCTTATCGGAAGGTCC
TAGAACAAGAGATCGTGAACAAGGTATTGAGACTGGTAGCGCACGCCGCGAGTTCCTGGC
TTACTGCCTCTCGTTACTGCGCGCGCACAGCGCCGAGCACGCGGAACAACTGCCGGTACT
AGACGTGGCCGCACTCAAGCACGTGGCGTACGTGCTCGACGCGCTCGTGTATTACATGCG
CGCCGCTCAGCCGCAACCGCATCACCATCACCACCACCACCATCATCATCTCTGGACACC
GCAGGATGAGAACGAGAATGAAGAGGGCGAGGAGGAGATGGTGGTGGCCGGTAGCGCTGC
TGCGGAGTCTGACGGGGAGGGAGATGGAGCTCGTGGCCGCGCACACGCTTTCTTCCAAAG
ATCGGACTCGACCCTCTGCCTCGGATGCCCTCCACCGGATCCGTTTAATATGACAATGCA
AGACGCACTCCCATTGGCAGACCAGCCACAGTTATTGCAACCGAATGCGCGCCGCGAGGA
GTTGTTCGGTATGCCGCGCCAACCCGTCACCGTGCCGCCAGCAGGAGACGCTCCTCCGGG
TTTTAACAATCCCTTGGAAGTAGTACCCCGCCGGCTTGGCTTATCTAATCGCGGTACTGA
TCGGGGTTGGTCGCCGGCGCTGCGCCCCGCGTCCGCTCCGCCAAATCACAACCACACTCT
CACCAGAGATGAACCACAGGATCTGTCATGTGCGAAGGATGCTCCAACTAAAATGGACGT
TGACACCGATGCCGAATACGTGTCCGATTCAGATTCCAACGATGCGAGGTTGATGCCAAG
GAAAAAACTCCACAGACATCCACATTCCATGGCAATGACAGCGGTTACTTCTCTACAAGA
TTCCACGTCACAGCCATCTGAGTTCCACACATTAGTTAATACAGCTTGCTCGATCATGGA
GGCACCGCACGAACAAACCCTCGTTGCAGCAGCATTACCAGGACCAAGTGGTTCTTCGAC
CAGCACAACAACGGAATCACGAGCATCATCCTCGCGCAGCCCTGGCAAGACCGTTATTGG
TGAATTATTAAGTGCTGCGGATCCACTAGAATCTCAGGAGATCTCTGCTCATGTGACAGT
TGAAACAACAGGTTTGCCACCACAAGTACATGTGCCACCACTGAACACGCCTCCTGCACA
GCCCCGTACGTGTCCATCACTGGGTGCTTCGGTATCTCATGATCTTTTACTTGGACGTTG
GCGACTTTCTTTAGACTTGTTTGGACGTGTTTTTACTGAAGACGTTGGGTTAGAGCCGGG
CTCCGTTGTAGCGGAACTCGGTGGTTTCCCGGTTCGGGAACTAAAGTTCCGCAGAGACAT
GGAAAAATTGAGAAACTCACAGCAGAGGGATTTGACTTTACATAAGATGGAACGTGATCG
TGCAAAACTGTTACAACAAACGTTCGCGGAGTTGAACAGCGCGTTCGCTGGACAGAACCG
ACGCGCCCACAGCGCACAGCCGCCGCTCGCCGTCAATCGGGTCAAGGTGACGTTCCGCGA
CGAACCCGGCGAGGGCAGCGGTGTTGCCCGCTCATTTTACACCAGCGTGGCTGAGGCATT
ACTGGCAAACGAGAAACTCCCACCATTAGAGAGCACAACAAGCAGTGGAAGTAACAGTAA
CACTACAAACGGAACCGCGGGTTCTGCCGGCACCACACCCGGTGCAACTGTCAGCACTAA
TACACCAAGAGGAGGTGGTCGTGCTCGTTCGAAGGAAGGTGCAAGGCGTACGGCAGGACG
TCCTCCGCCGAGAGCCGCCGCTGCCGCTGCCACCGTAGCTGCAAGGGAGCCACGGCGTGT
GCTCAGTGTAGACGCCCGACCGTATTCCCCACAGGCTGCACCTGGTACTGATGCCGCCGG
TTATAGCGGAGAACGTAGCGGAGGTCATAATGATCATCTAACACATCATCAGGCACAACT
CGGCGAAAGACTTTATCCAAGAGTACATTCGCTTCACCCTACGTTTGCGGGAAAGATAAC
TGGAATGTTGTTGGAGTTAACGCCGGCTCAACTGTTAGTGTTACTCGCTAGTGAAGACGC
GTTACGACAGAAAGTTCGCGAAGCAATGGATCTCATAGTTATGCACCCATCAGAAGCAAT
ATTAGATTTAGACGTATTCTCACTATCGGAGCGCGCCGCCGTCAGTAACGGCGGAGGCAA
CGTGGCTGGTACTACTGCAGGTTCCACGCCACCGCCCGCCCCGGCTGATGACGCAGCACC
GCTGTTCTACTCCCCCGGCAAGCGCGGCTACTACTCGCCTAGGCAGGGTCGTGCTACACC
AGAGAGAATTAATGCCTTCAGGAATGTTGGCAGAATTATTGGGCTATGCCTTCTTCAAAA
TGAACTTTGCCCAATGTTCCTTAATCGGCACGTGTTAAAATATATTCTTGGCCGACCAAT
ACGCTTTCACGATTTAGCATTTTTCGACCCCGTAGTTTATGAAAGTCTCCGGCAGCTAGT
CGTTGATGCTGAAACTGGTGATTCTCATTCTCTTTTTGCTGCTCTAGATCTCAACTTTAG
TTTGGAAATGTGTGAAGAGGAAGGTGGTGGGTGCGTCGAACTAGTCCCTGGGGGTCGAGA
GCTCGAAGTAACCGCACACAACGTCTACGACTACGTACGTAAATACGCCCAGCACCGCAT
GCTTCTCTCACAAGAGAAAGCACTAGAGGCAATCCGTGTCGGTGTGCTGGACGTGGTGCC
AGAGTCCGCACTAGAGGGTTTGACTGCTGAAGATCTGCGGTTGCTGTTGAATGGTGTCGG
TGACATAAACGTTACTGCGCTCGTATCTTACACTAGTTTCAATGATGAAAGTGGGGAACC
TTCAGAGCGACTCGCCCGTTTTAAGAGGTGGTTGTGGGCCATAGTTGATAAGATGACACA
TCTCGAAAGACAAGACTTGGTTTATTTCTGGACCGGGTCGCCAGCCTTGCCTGCTTCTGA
AGAGGGATTTCAGCCAATGCCTTCAGTGACGATACGACCAGCAGACGATGCGCACTTGCC
CACCGCTAACACGTGTATTTCGCGGCTCTATATACCGTTGTACTCTTCGCGTCATGTGCT
CAAACATAAATTACTGTTAGCCATCAAAACTAAGAACTTTGGTTTCGTCTAAATTCAAAT
CGGTCATTTTGTCCCTTAGTTTTTTTAAGCCCAGTCATGGAAGACTGCCGCTGTATTCCA
TTGATATAGATTTATCAAACAAAAATTTTGTATAATACTGGATTGTATTTGTGTTTCTCT
TTTTATATTTCACTACAACTATCTATATGTAAAATTTAGACTTTATGTGCTACACGACCA
AAATATACATGACTGGGTATATCTGACTGAATAGTAATATTCAATAACTTTATGTTATAA
TAATACCCTGATGCGTTGGTCCGCACAAGTACATAGTAATCTTTAAAATAAAATATTAAG
CTCATAGCAGGTAAGTATTTAATTGTTATCGAAAATGAATCACAAACTTTATCAGCCTTG
GTATATTGATTTTAGATGATCATATATAGATTTCAACATGTACAAGTCAATAAATACAGG
TTTGTTCATACTTATCTAGTGGCCTAATTTCTGCATTTGGTTGCTCTTTTTATTTACATT
ATTTATTACAAATATAGCTCCATGGCGAGTTAGTTAGTGTAACTATAAAATATTAGATAT
TTTTATGTTTATATAGCTTTGTTAAATAGTAAAAATTATAGAGGATATTAAAAGATGATG
ATACTGCTACAAAATAATTGGGTTTGGATAGTGACATTGGATTCCAGAATATGATGGTTT
TGTGATATAATAGGAAGGAAGTATTTATGCG
(5851 bp)

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