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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38420_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PDZ_and_LIM_domain_protein_Zasp_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:18.27 TPM:17.69
ORF EntryO_SariASG15421_complete:A_SariASG_c38420_g1_i1
Sequence
(Nucleotide)
CTCAGCTCGCCATTGCTTCACGATCGAACGACCAACGCCCGTGCCTGGTGTCGTATTACT
ACTCTAAATATATCTCGTGAGCGCGATCGCCAATTTGGAAACGGTCGTGCGCCGTGTTTT
GATCCGGTGATTGACAGTGCCGACTGAAGAGTACTCCTTCTCTGAACCGACAAGGCTCGC
ACTACAGACATGGCACAGTTGATAACTGTGCGGGTTAATAAATCCGACCACCAGCCGCTG
GGAATCAGGCTGCAGGGTGGCAAAGACTTCGGCACACCACTTGTCGTTCAAAAGGTGAAT
GGCGGTAGTCCAGCAGAGCGAGCTGGTCTACAAGCTGGAGACGCGCTTATCCGTGTGAAC
GCCACTGACGTATACTCACTAAGGCATCAAGACGCACAAGACGCTATACGTGGTGCCGGG
TCTGCTATAGAACTCACCATACAACGTGGTGGTGGCACATGGCGCCCTACGGTGACTCCA
ACCGGCAGTCTGCCTAGACCTGGTTCACGTCCCCTTGGTGCGGCACCAACGCCCGTCACC
AACACCTCTTTGAAAGCGACGCAGCAGCCCACGCGAGCTTTTGGTTCAGGCCACAACAAT
GTCGCAAAGCCATTTGGTTACATGAACGGTAATGACCCTGTGAAAAGCATAGTCAACAAA
CAGTACAACACGCCTGTAAACATTTACAGTGACAAAACTATTGCCGAGACACTCTCAGCT
CAAACTGAAGTACTGGCTGGTGGGGTGCTGGGAGTCAACTTCAAAAAAAACGAGAAGACT
TATGACGCGGAAAAGAGTGCAGTTTTCAAAGTTCTTCAAGAAGAACAAAATGACCCGGAA
CCAGTCGAAGTGCCGGCGGCGAGCTCCGTCCCGGCGCCGGTGAGCGGTCTCCGGCACGTG
CAAGCGCCCGTCACGCGACCTGAAGCGCCTCTCAACAACACGGGCGGTTTGCCTCCCGGA
CAGAACATTTGCGAGGAGTGCGAAAGGCTCATAACCGGTGTGTTCGTACGCATCAAGGAC
AAGAACCTTCACGTGGAATGCTTCAAGTGCTCGACTTGCGGCACATCGCTGAAGAACCAG
GGATACTACAACATAAACGGGAAACTGTACTGCGACATACACGCGAAGTTAGTCGCACGC
CAGAACCCGCCCGCGCCTAACCTCGAGCCGGTCACCGTGCCACCTGGTGCACGTATTCCG
AGTAATACATACTCCACTCCGTTGCCGCCATTATCTACCAACAACTACACCAATGGATCT
TCTTCACTCTTTAGTCCATCAAGTAACTTGTCCGGACCTAAGCCATTCGGATCGTCAATC
GGGTCTGCGTACTCGCCGTCGTTGTCTCCCCGGTCGGGGCCGATGTCGCCGGCGCGGCCT
GTGCCAGCGCCTGCATCGGCGCCCGTACACGCGCCTGTACACTCGCCCGCTGCGCCTGCA
CCGACATTCGCACCTGCAGCTCCGCCTCAACCACCATTCGCTCCTATTACTGAACCACAA
ACTACGAGTAGTCCATATAAAACAGAATACAAAAGCCAAGCAGAGGAAAGACTTATAAGG
AAAATGGCTAAAATGGCTTTAAATGGTTATGAGATTGGCATACAAAGAAAAATTAAACCA
GCTGACCACATACAATCTATGGCTGATAGAATCCAGGATACCATAGTTACTAAACACCCT
TTGAATGCTGATGGCACATCTTCTGGCGAAAACAGTCATGATAATACTTTAAAAAGATCG
CCTAACAAGATATCAGATCAAAGTTACAAAATGTATGATAGCATGATGAGTATTGGTGAT
AAAGTAAAGGATATAATATATAATAACGAATTAGAGAAAAGTAATTTTAATGATAGCGTA
GCTGTGTGTGGTAGTGCACCAGTTCCTCCACCGCTGCCTACTTCTCCCATGCCTCTATTT
AATATTCATAGCACACCTACTGGACATATAACAGCTCAAGCCAATATAAAGAAACAATCA
GATAGTTTTCCTAAAAATTTTACAAGTCATATTACATCAACTGCTGAGTTGGAAAATAAT
GATAAATCATTAAATGGTAGCGATTACTCTAGTAGTGAAGACTCCAGCAAAGAAACGAAT
ACATTAAGAAATAAATCATATGAAAAATCATTTTTAAATAGTTCTAACATAAACCAAGAT
GTCAAAAAATCTGAATTAGTTCTTGATAATAATTTCTACTCTAACACATTAAATAAAAAG
AAAATATTCGAAAACAAGGACCTTACAACAACATCATCCAATTCAGATAATGGCTTAAGA
GCTGGTAGTTGCGTGACAAATACATTGGATACAAATACTAAAAACAGAATCAATATTTTC
GAGATTTCTACGAGTTCCGAAGATAAAATAAAGAACCATCATCAAAATGGCGAAAACAAA
TCCTTTTCTAGTAACTTTAACGACCTATCCTATAATTTAAGCAAATGTGACAACGATTCT
ATAATTGATATTGTTAAACAAGACGATGAAGAAATACTTCAGCCTGAGGGTATAAACAAT
GTTAAAGACAACACAGAACCGGAAGTCCTGGTTAAAAGACGCCAGAAAAAAACTAATCGC
AATGATGATGGGAGAAGAGATTCTCATATAATTGCTAGACCATTGAGCACAATGACTTCG
GTTGACGTGACGGATGGACTTTATCCAGTTTGTCATAAATGCGATAAGGAAATAACAAGA
GGGCCATTCATTACGGCATTGGGACGCATATGGTGCCCTGAGCACTTTATTTGCGTGAAC
GCAACTTGTAGACGCCCGTTGCAAGATATTGGATTCGTCGAAGAAAATGGTCAACTTTAC
TGCGAGTATTGCTTCGAACAGTACATTGCACCATCTTGCGATAAATGTCACGCCAAAATC
AAAGGTGATTGCCTGAACGCTATTGGAAAACATTTCCACCCTGAATGTTTCAACTGTGTC
TATTGTGGAAAACTATTTGGCAACAATCCGTTCTTCTTAGAAGACGGATTACCATATTGT
GAAGCAGACTGGAACGAGTTGTTTACGACGAAATGCTTCGCTTGCGGGTTCCCCGTGGAA
GCGGGCGACAGGTGGGTCGAGGCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGC
ACGGTGTGCAAAAAGAACCTCGAAGGACAGAGTTTCTTCGCCAAGGGAGGTCGACCTTTC
TGTAAAACGCACGCCCGCTAGATCACCACAAGTTATCTATAATTCCGACACTGTTTATTC
GACGATTACTTTTCGCCCGGTTTCACCATCTCCTATCACTTCGCCTCCACCTAACTCCCC
TTTATTGCGCAGAACAAGAAAACTGGAAACACCCCTCCACTTCGATGGAGGATTGTTTTC
CGATATTAGAAGCACAGACGGAAAATTACTAAGCAAAGTAACAGTGGATAAAGTGCTGAG
ATCAACACACCATGATATTACTGACTCTCCGAGTACTGAAGTGCATTACGATGAAAGAAA
TTATGTCGATGACATAACTAAAACTGAGATGATAACTAATAAAGATGTAATTACAGTAAA
ATTCACGCCAGTACAACGCGAACTTGAATCTCCGGACTTCTTGTCGACTATGCAGGAAAA
TCAGACCCAAGATAGTAGTGTCACTTCAGTGGAATATATAAAGGATGATTTTAAAGATTT
ACAAAGTTACAAAATAGTTAATTCATTATGCAAGACTAAATTATTTGAAATGCAACAAAC
AGATGATAATAAATTAGATACGCCAAATACAGAGAACTGTGTGAAAGAGGGAGCAGATAA
GTTAAATATGTCAGTATGTATGGACAAAGAGTACAGCCAAATGAAAAGGACTCCAAATGT
TGAACTATTATCTGGAATAGAAAAAGATAAATTAGATATACCGGATACAACTCACATAGT
AAAAGAAGATTCAAAAGAACGTAGTATCACAGTATTCAACAACAAAGAACATAGTCCCTT
GGCTAACTTTTTAGTCTCTGAGCAATTGTCTAGAATAGATAATAAATTGCAAGAGAGTCT
GCAGACATGTTTCGGCGTTGATAATAATATAAATTTTACAGCACAAAACGAAGCAATCAA
TAAGAAAAACGAAGTATGTGAATTAGAGCAAGATTTTGAACAAAAATCAAATAATTATAT
TAACAGTTATCCAGGCGAAGTGATTCGAGAAATCGGTGGCAATCATGACAAGTTTGAAAC
TAATAAAAATGCAATAGATATAAGTAAGTTGAAAGCGAAATCGAACAGTGGCCGTAACAA
GATTTTCGGATTTCTGCGAAATATTTATAATTTGCCTATACATTATCACGCGGCAATTTT
ATGTTTCTTTTTAATTGTGTACAACCTTATATACCAGTACATTAAGCAAAAATATGAAAA
TAATAAGAAATTAACGTAATATTAAGGATATATAATCAATAAAAGTGTATGCGTTAAACT
AGTCATTGCATAATTATTATTGTTCATAATTTGTATCTATTCGGTAGGTACATGTATTGT
TTTTTTTTCCATTGGACGTGATGTAAATAGCGACAGATCGGAAGAGCGTCGT
(4552 bp)

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