SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38379_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		uncharacterized_protein_LOC110373912_isoform_X2_[Helicoverpa_armigera]
Ontology
GO:0000407 C phagophore assembly site
GO:0000932 C P-body
GO:0001934 P positive regulation of protein phosphorylation
GO:0002376 P immune system process
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016234 C inclusion body
GO:0016235 C aggresome
GO:0016236 P macroautophagy
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0042169 F SH2 domain binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0044130 P obsolete negative regulation of growth of symbiont in host
GO:0044753 C amphisome
GO:0044754 C autolysosome
GO:0046872 F metal ion binding
GO:0051291 P protein heterooligomerization
GO:0061635 P regulation of protein complex stability
GO:0070062 C extracellular exosome
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0097225 C sperm midpiece
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:4.10 TPM:3.97
ORF EntryO_SariASG15340_complete:A_SariASG_c38379_g1_i6
Sequence
(Nucleotide)
TGTTTGCTTGTAACTTTTTAGTTTGTATAAATTTTATCCGATAATTTTATTCAGAATTAA
AATTTGTAGAGATTTTAGATTTGAAATATGGTAAATTATTGTTGCGTTTATGGATGTGGC
CGAAATAGCAGAAACAGTAAACTCCTGACATTTTTCTGTGTGCCTAAGGAAATAAATCGG
CAGATAGCATGGCTGCAGGCAGCTGGTAGAGATGATCTGCTTCTAATAAAACCAGAGCAG
AGAATTCGAAGTAGATTTTGTTCTAGACATTTTGAACCATCCAGTATAAAAAACAAACAT
TTGTGTGCTGATGCAGTACCAACTAAATGTCTTCCAGGAACATGGAGTGATGAAGATGTT
GACAATACTGTGCAGCAGTTGCACAAAAATATAGTTTGCAACAGTTGTAATGGTGAAATC
CTCGGTTTCCGATATAAATGTGTAACATGCCCGGATTATGATCTTTGCCCCAAGTGTGAG
ATGCTTGAAATACATCCAGAACATTTTATTATAAGAATACCACAACCTTTAAATTTTAAA
GTAGCCGATACTCTGTCGACAAAATGGCGGCGATTTTTAAACGAGGAAGGTATAAATTAC
ACGACAACACTAGAAAATGACAGTAGTGATGATGAACCAATCACGAAATATGCAAAGAAC
TATGACAGCGGTATCGATCTATCAGAAGACATCAAAAACCAAATTCGTGATGAAGTCACT
AAAGTACTTAAAATGACTACAAACATAGACGGTAATAACACGGTTGTCAAGAAAAAGTTA
TCAAGAAAACGTCAAGGTACTGACGTTACAAGAACTACAAAGAAACAAAAGGTCGAAGAG
GGAGATGGTTTACCGGAAGTAGTTTTTGCTGATGTGAATGAAATAAATAATCCAATTTTG
GATGTTAAAAATGAAACTTCAATTATTCTTGATGAATACCAGTTGCCCGTTGATGATGTA
ATGAACAATGCATTAACAAATCTAAGGTTTGCAAATGTAAAATCTGATTCACATACTGTT
AAACACTGAATCTGTTTGTATCTCCGAAGAATGAACAGATCGGAAGAGCGTC
(1072 bp)

- SilkBase 1999-2023 -