SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38290_g1_i7
Scaffold_id
NCBI non-redundant
(nr)		DNA_excision_repair_protein_haywire_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:1.08 TPM:1.05
ORF EntryO_SariASG15191_complete:A_SariASG_c38290_g1_i7
Sequence
(Nucleotide)
GTTTTTTTCATACTAATTTTATCATTGCTGCAGTTCTTTTGGTGTTTTGTATATCTATAC
ATTACTGAGTGCTATTAGGTGTAACCATGAAAATCTACATAGATTGATTATATTATACCA
ATAAAAAATCTCATCTGAAAGTAAACTAGTAAAGTTCCAAAAATGGGACCACCAAAAAAA
AATAAGAAACATGACTCAAAGGTGGGGGGTGATAGATCAAATAAAAAAAAGAAAATGGAA
GAGGATGTGACCATAGATTTGGTGGATGATGATAATTCCGAAAATGTCGGCGTGCCGGGA
GCCGCTTTGCAAGATGCTGAAAAGAATGATCAAGTTCCGGAAGATGAATTTGGCGCCAAA
GATTACAGGAGTCAAATGCAACTCAAGGCTGACAATACCAGCCGCCCACTATGGGTAGCA
CCAAATGGCCACATATTCCTTGAAGCGTTCTCTCCTGTTTACAAACATGCTCATGATTTT
TTAATTGCTATTGCAGAACCTGTTTGCCGTCCACAGCACATCCATGAATATAAGCTAACA
GCATACAGTTTATATGCAGCGGTATCGGTGGGCTTACAAACTAATGATATTATTGAATAT
CTGCAAAGGTTAAGCAAATGTGCTGTACCTGCAGGAATCATAGAATTCATACAGCTGTGC
ACTCTCTCGTATGGGAAAGTCAAGCTTGTTTTAAAACATAACAGGTACTTGGTAGAAAGT
AAACACGTAGAAGTATTACAGAAGTTATTGCGAGACCCAATAATTCAACAATGCCGCCTT
CGGCGTGACGGTGACGATGATTTAGTTCCCTCCGCGTTACCAACCACACAACAACCGACC
ACCGCAACCAAACCAGTTGGTGAAGAAAAAGTTTCGGCTAACGGAAATGTACCTGACGAT
ATAAGCCAATTCTACCAGCAGTTGGATAAAGACGATGATGACGATGAAACTCCAGGTATT
ACTACAAATGCAGCGGTCGCTTTCGAAGTCGATCCGGATAAAATCGAGGTCATACAAAAA
AGATGCATTGAACTTGAGCACCCACTTTTGGCTGAATACGACTTTCGCAATGACTCCATT
AACCCTGACATCAATATTGATCTCAAACCAACTGCAGTACTACGCCCTTATCAGGAGAAA
AGCCTTAGGAAAATGTTTGGAAATGGTCGTGCGAGATCAGGTGTGATAGTGCTACCGTGC
GGAGCTGGTAAATCGTTAGTGGGTGTAACGGCTGTGTGCACGGTGCGGAAACGCGCCCTA
GTGCTCTGTAACTCTGGTGTTTCAGTCGAACAGTGGAAGCAACAGTTCAAATGCTGGTCC
ACAGCTGACGACAGCATGATATGCAGGTTCACGTCAGAAGCGAAAGATAAGCCGATGGGC
GCCGGGATACTGATAACGACGTATTCGATGATAACGCACGGTCAGAGGAGATCGTGGGAG
GCGGAGCAGACCATGAAATGGCTTCAGGCACAAGAGTGGGGTCTCGTTGTACTCGACGAG
GTACACACCATACCCGCTAAGATGTTCCGGAGAGTGCTGACCATAGTACACTCGCATGCT
AAACTGGGGTTGACTGCTACTTTGCTTCGTGAGGATGATAAGATCGCTGACCTGAACTTC
CTTATCGGTCCGAAGCTTTACGAAGCGAATTGGTTGGAGTTGCAAGCGAATGGGTACATC
GCGCGAGTGCAATGCGCCGAGGTCTGGTGTCCCATGACGCCGGAATTCTATAGGGAATAT
CTCATACAAAAGATTAACAAAAAAATGCTGTTGTACGTAATGAACCCGTCGAAATTCCGC
GCCTGTCAGTTTCTAGTGCGGTACCACGAGAGACGCGGCGACAAGACCATTGTGTTCTCA
GACAATGTATTCGCTCTGAGACACTATGCCGTTAAAATGAACAAGGTAAGGTGAGGTCAG
TGATTCCCAACTTTTTCCTGACGAGGGACCAATTTGATTTCTTTATTGATAGCAGGGACC
ATTATGAGTAAAAAAAACCTAAACTGAGT
(2009 bp)

- SilkBase 1999-2023 -