SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38281_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		glutamate-gated_chloride_channel-like_isoform_X6_[Bombyx_mori]
Ontology
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0005254 F chloride channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0008068 F extracellularly glutamate-gated chloride channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0034220 P ion transmembrane transport
GO:0034707 C chloride channel complex
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0048812 P neuron projection morphogenesis
GO:1902476 P chloride transmembrane transport
Transcript
Level		FPKM:5.44 TPM:5.27
ORF EntryO_SariASG15165_complete:A_SariASG_c38281_g2_i1
Sequence
(Nucleotide)
TGCTCTTCCGATCTCTCGGCTTCGTGCTTCGACCGTCGCTGCCCACCACACCCTACGCAA
TATGTGACACCCTGTACCCAGAATGAGACCTAAACGAGTATTCTGTACAGTTGACATTCA
GGGAGCAATGGTTAGACGAGAGGCTCAAATTCAACAATTTAGGAGGTCGTCTCAAATATT
TAACCCTGACTGAAGCGAACAGAGTATGGATGCCGGATCTGTTCTTCTCCAACGAGAAAG
AAGGCCATTTCCACAACATCATCATGCCGAACGTATACATAAGGATCTTCCCCAACGGAA
CTGTCCTCTACAGCATCCGTATATCTCTAACTCTCTCCTGCCCGATGAACCTCAAGCTTT
ACCCGTTAGATAAGCAGACCTGCTCGTTAAGAATGGCCAGCTACGGTTGGACGACTGATG
ACCTCGTTTTCCTGTGGAAAGAGGGTGATCCTGTACAGGTTGTGAAGAATCTTCACCTGC
CACGTTTTACACTAGAGAAATACCGGACTGATTATTGTAATAGTAAAACAAATACTGGTG
AATACAGTTGCCTTAAAGTTGACTTGCTCTTCAAACGTGAGTTCAGCTACTACCTTATCC
AGATTTATATCCCCTGCTGCATGCTCGTCATCGTCTCCTGGGTTTCCTTCTGGTTGGATC
AAGGCGCAGTCCCCGCCAGGGTGTCTCTTGGAGTGACAACATTACTCACGATGGCTACCC
AATCATCAGGCATCAATGCCTCTCTGCCGCCGGTGTCTTACACCAAAGCCATTGACGTGT
GGACCGGTGTCTGCCTCACCTTTGTATTTGGGGCATTATTAGAGTTCGCTCTAGTGAATT
ATGCGTCCCGCTCTGACATGCACAGGGAGAATATGAAGAAAGCGAGACGTGAGATGGAAG
CGGCAAGCATGGATGCGTCTTCAGACTTATTAGATACGGATAGCAATGCAACGTTTGCTA
TGACGCGCCAGTTCGAGATCCACATGAAACCGAAGAAGAAGAATTGCTGCAAACTCTGGA
TGTCAAAATTCCCGACCAGGTCCAAGAGGATAGATGTGATCTCAAGAATCCTGTTCCCGC
TTGTATTCGCTATATTTAACTTGGCTTATTGGTCCACGTACCTGTTCCGGGATGAAGAGC
AGGAGAAGTGATTCGACGAGATCCCGGAGACGTGGCAGGTGGCACGGTTGTCGTGCGCGG
TGCTCGCTCCGTATGTGGTGTTCGCGATCGCGTATTTCATATTCTTACGCGACAGAGGAA
CGGTAGCACCCTCCGCAGTAGTGTCCTAAGTCAAGTGCCTTAAGCCATGACGGCACTCCG
ACCCACAGCCCTATAGCACCATTAACAACTTCTGTTAAACACTCGGTGACGGGCCCGTCC
CGGAAAGTGTTTGCATCGTCCCCGGTAGATCGATAATCGAATCACTAATTAATAAAGTTA
AATAATTAGAACTGCGTGAACATTATGAATGTACAGACTCGTCGAAAGTTCAACGGAGCA
TTGTGTGACCCTTTACCCTGCGACTTCGGCCAGATCGGAAGAGCGT
(1546 bp)

- SilkBase 1999-2023 -