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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38249_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Pre-mRNA-splicing_factor_CWC22-like_[Papilio_machaon]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006909 P phagocytosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0071006 C U2-type catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:15.66 TPM:15.17
ORF EntryO_SariASG15122_3prime_partial:A_SariASG_c38249_g1_i1
Sequence
(Nucleotide)
CTCTTGTCAGAACTGTCTTGATAAGCGTGATAGTATTCGTAATAAAATTTAAAAGCAACG
TTATATAGATAATATTATAGTCAGATTAATTACTTTTGTTATATATGTATGAAAAAAGAG
ATTAGTGTTATATTGTGTGTTAATTATGGACTCTGTTAAGGAAGAAAATCGAAAAAAGCA
TAAGAACGACGACTATCGTGATGAAAGGCCAAGATATCACAAACGGGCTCGTTCTAAATC
ACGGTCACCGACGAATAACCGCGAAAAAACTACTGGACGTAAACGTAGATATTCTCAGTC
ACCAGAGGTTCAAAGGAAACATGATAAAAAAGATAATAAAACCCAAAAGAGTGTACCGAC
CAAAACGGATGCACCTGAAAATCCCGTACGTCGCGCTAAAGAAACCGATATGTTGAATAC
TAGAACAGGAGGTGCTTACATCCCTCCTGCGCGGCTACGAATGATGCAAGCGCAAATCAC
AGACAAATCGTCTTCTGCGTACCAAAGATTAGCCTGGGAAGCCCTAAAAAAATCAATACA
TGGTCATATTAACAAAATAAATGTAGGAAATATTGGTATTATTATCAAAGAATTATTAAA
AGAAAATATAGTCCGTGGAAGAGGTTTACTGTGTAGGTCAGTTATTCAAGCACAAGCTGC
ATCACCTACTTTTACTAATGTTTATGCAGCACTTGTTGCTGCTGTCAACTCCCGCTTTCC
TAACATTGGTGAATTATTATTAAAAAGATTAGTGATTCAGTTCAAAAGAGGTTTTAAGCG
TAATGATAAAGCTATTTGCATATCATCTGCATCTTTTATTGCTCATCTAGTTAACCAAAG
AGTTGCACATGAAATTCTTGCATTGGAACTACTAACTTTACTAGTAGAAACACCTACAGA
TGATTCAGTAGAGGTTGCTATTGCATTTTTAAAAGAGTGTGGACAAAAATTAACTGAGGT
ATCATCAAAAGGAGTTAATGCCATTTTTGAAATGTTAAGAAATATTTTACATGAAGGACA
GTTAGATAAGAGGGTCCAGTACATGATAGAAGTAATGTTTCAAGTTTGGAAAGATGGATT
TAAAGATCATCCTGCTTTAATTGAGGAACTGGAGCTGGTGCCTGAAGAAGAACAGTTCAC
TCATTTGTTAATGTTGGATGATGCCACTGATCCTCAAGATATATTGAATGTCTTTAAGTT
TGATGACAAGTTTGAAGAGAATGAACAAAAGTATAAAAGTTTAAGTAAGGACATTCTTGG
TTCTGATGAATCCGGGGAAGAAGGTGCGTCTGCGGAGAGTGGCAGTGAAGAATCTGATGA
AGAAGATGAGGAAGAGGAGAAAAAGGAAATGACTATCATTGATAATACAGAAACCAATTT
GGTAGCATTAAGACGCACAATATACCTCACCATAAATTCAAGTTTGGATTTTGAAGAATG
TGCCCACAAATTAATGAAAATGCAATTAAAGCCTGGACAGGAAGTGGAACTGTGTCATAT
GTGTTTAGATTGTTGTGCAGAACAGAGAACCTATGAGAAATTTTATGGATTGTTAGCTCA
ACGGTTTTGTAACATCAATCGCATGTATATTGGTCCTTTTGAGGAAATTTTCAGAGATTC
CTATTCAACAGCACATAGATTAGATACCAATCGACTGAGGAATGTCAGCAAGTTTTTTGC
ACATCTTCTTTTTACTGATTCCATAAGTTGGGAAGTACTAGAAAGTGTTAAATTAAATGA
AGAAGACACAACTAGTTCTAGCCGTATCTACATTAAGATTCTCTTCCAAGAATTAGCAGA
ATATATGGGGCTGAAAAAACTTAATGACCGTCTGCAAGATCCAACTTTGCAAGATGCCTT
TTCAGGTATTTTTCCAAGAGACAATCCCAGGAACACGAGATTTTCTATCAATTTCTTCAC
ATCAATTGGTTTAGGTGGATTAACGGATGAATTACGTGAACATTTGAAGCAAATGCCTAA
GAATGTTCCTGCACCTGTTGCTGATATTACATTGGAAAGTGAAGATGATTCGAGCTCCAG
TTCTAGCAGTAGTAGCAGTTCAAATGGATCCTCATCATCTAGTGACTCCAGCTCGAGTGA
TACAGAGGAAGAATCTAATAAGAAGAATACGGAAAAGAAGAAGTCCAAAAGGAAAAATAA
AGATGAAAGATCAAAAACTCCACAAGAAGATAATACGGAGAATAATAAAGCTAAAGAGCG
TTGGGGACATGATGGCTTTTACGATACATATGGTAAAGATGCAAGGCGAACTGAGCCCAG
ACAAGGGAGAGATACTTTCGCTCGTCCACATGATGTCAGAAAAGTTGATCGGAACAAGAA
GATTGATCCAAGGAGAGAAGGTCATCAAAGAGAAACACAAAACGGAAGTAGGTCAGAAGA
AGAACCTCGAAGAAGTA
(2417 bp)

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