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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38211_g2_i4
Scaffold_id
NCBI non-redundant
(nr)		DNA_cross-link_repair_1A_protein-like_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000784 C chromosome, telomeric region
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0031848 P protection from non-homologous end joining at telomere
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0036297 P interstrand cross-link repair
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:9.79 TPM:9.48
ORF EntryO_SariASG15042_5prime_partial:A_SariASG_c38211_g2_i4
Sequence
(Nucleotide)
GCAAAAACTCGGGCGTTAATAATTCTTTGAAAACTGAATTCGTTTCGAAAAGATTACCTA
ACAGAAGTGTCATTAGTAAAGGTAATGACTCTCCTACATCTACAAGAGTTGCTTCTTCTA
AAAGGGAATCGCGTTACTCACCAATAAACGAAATAAAAACTTATAACTATGAAACTCGTC
GGATCTCATCACCGTCGGCTAAAAATGAAACTTTAAATTCACATTCTCCAAGAAAAAATG
GAGATTCAATACAATACAATTTGCCGTCGATATCGAAATCTAATAAATGTACGATATCGC
CTAAAAGCATTCCTCATCATAAGATTGTGACAGGAACAAACTTTGCAGTGGATGCCTTTT
CTTATGGAGAAATACCAAATGTTAAGCATTATTTTCTATCCCATTTTCATTCTGACCATT
ATTCTGGTTTGAAGAAGAGTTTTAGTAAACAGTTATATTGTTCCAAGATAACTGGCGAAT
TATGCGTATCGCGGCTAGGTGTCAACGCGAAGTACATTCACGTTATCAAAGTAGACGAGA
CGATACGAATCGAAGGTGTTGAAGTGACAGCTGTCGAAGCTAATCACTGCCCCGGTGCCG
TGATGTTCGTTTTCACGTTATCAAATGGGAAAACGTTACTTCATACTGGGGATTTCAGAG
CATCGCCCGATATGGAATCGTATCCTATATTCTGGAATAAGGATATACATACGATTTACT
TGGACACGACGTATTGTAACCCTCGGTACGATTTTCCAACGCAAGGTGATAGTTTAGAAA
TGGCTTTGTATATTTTACGTCAGAAGAAATTTACCCTCGAGAAGTCTGGCAAGAAATTCT
CGTCAGTACTCATCGTTTGTGGGACTTACACTATTGGCAAAGAAAAGTTCTTCCTAGGCA
TGGCTCGTCGTGCCGGTTGCTCGGTGTGGGCTTGCCCCGAGAAGGATCGAGTCCTGCAGA
CAGTCGAAGGTCGTAGTTACAGTCACGGACCCCCTCAGTCTTGTCAACTGCACGTCGTTC
CTATGAGGGACCTTACACTTGAGAAACTACGAACTTATTTAGATAGTTTGAAAGGGGCGT
TTAATGAAATCGTCGCTTTCAAACCGAGTGGGTGGGAAAATGGGAAAAATTCCGCAGTTG
AAAAAGACATGGTCACTATTCATGGTATACCGTACAGCGAACATTCTAGTTTCTCGGAGT
TGATTCGTTTCGTGAAATATCTAAATCCGAAACAAATTATTCCCACCGTAGACATATCCG
GAGGTATCAAATCCGTTCAGAAATATTTCCCCTGTCCGATGGTTTGTAAAGACGACATTC
AATGCCAGAGCAGAGTTACAGACTGTTCCAATACAATGAAACGGCAGCAAGCACCCGCGG
CGGTCGCTTGAACTGGAAGATTTATGAATTGTTATCGCATGGATAACATTAAGAAGATAT
AGAGAGGCTGTGATATATTTTTATTTTGTTTTTTATGTTTTAGGTTTTATTTTTAAAAGA
GTGTTAAATAAATATGTTGAAAATCGAAAAAAAAAAAAAA
(1540 bp)

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