SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38211_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		DNA_cross-link_repair_1A_protein-like_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000784 C chromosome, telomeric region
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0031848 P protection from non-homologous end joining at telomere
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0036297 P interstrand cross-link repair
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.71 TPM:0.69
ORF EntryO_SariASG15038_5prime_partial:A_SariASG_c38211_g2_i1
Sequence
(Nucleotide)
GCAAAAACTCGGGCGTTAATAATTCTTTGAAAACTGAATTCGTTTCGAAAAGATTACCTA
ACAGAAGTGTCATTAGTAAAGGTAATGACTCTCCTACATCTACAAGAGTTGCTTCTTCTA
AAAGGGAATCGCGTTACTCACCAATAAACGAAATAAAAACTTATAACTATGAAACTCGTC
GGATCTCATCACCGTCGGCTAAAAATGAAACTTTAAATTCACATTCTCCAAGAAAAAATG
GAGATTCAATACAATACAATTTGCCGTCGATATCGAAATCTAATAAATGTACGATATCGC
CTAAAAGCATTCCTCATCATAAGATTGTGACAGGAACAAACTTTGCAGTGGATGCCTTTT
CTTATGGAGAAATACCAAATGTTAAGCATTATTTTCTATCCCATTTTCATTCTGACCATT
ATTCTGGTTTGAAGAAGAGTTTTAGTAAACAGTTATATTGTTCCAAGATAACTGGCGAAT
TATGCGTATCGCGGCTAGGTGTCAACGCGAAGTACATTCACGTTATCAAAGTAGACGAGA
CGATACGAATCGAAGGTGTTGAAGTGACAGCTGTCGAAGCTAATCACTGCCCCGGTGCCG
TGATGTTCGTTTTCACGTTATCAAATGGGAAAACGTTACTTCATACTGGGGATTTCAGAG
CATCGCCCGATATGGAATCGTATCCTATATTCTGGAATAAGGATATACATACGATTTACT
TGGACACGACGTATTGTAACCCTCGGTACGATTTTCCAACGCAAGGTGATAGTTTAGAAA
TGGCTTTGTATATTTTACGTCAGAAGAAATTTACCCTCGAGAAGTCTGGCAAGAAATTCT
CGTCAGTACTCATCGTTTGTGGGACTTACACTATTGGCAAAGAAAAGTTCTTCCTAGGCA
TGGCTCGTCGTGCCGGTTGCTCGGTGTGGGCTTGCCCCGAGAAGGATCGAGTCCTGCAGA
CAGTCGAAGGTCGTAGTTACAGTCACGGACCCCCTCAGTCTTGTCAACTGCACGTCGTTC
CTATGAGGGACCTTACACTTGAGAAACTACGAACTTATTTAGATAGTTTGAAAGGGGCGT
TTAATGAAATCGTCGCTTTCAAACCGAGTGGGTGGGAAAATGGGAAAAATTCCGCAGTTG
AAAAAGACATGGTCACTATTCATGGTATACCGTACAGCGAACATTCTAGTTTCTCGGAGT
TGATTCGTTTCGTGAAATATCTAAATCCGAAACAAATTATTCCCACCGTAGACATATCCG
GAGGTATCAAATCCGTTCAGAAATATTTCCCCTGTCCGATGGTTTGTAAAGACGACATTC
AATGCCAGAGCAGAGTTACAGACTGTTCCAATACAATGAAACGGCAGCAAGCACCCGCGG
CGGTCGCTTGAACTGGAAGGCAAGCGTGTTTCAACTAATTTATACTCACAAATTTATGAA
TTGTTATCGCATGGATAACATTAAGAAGATATAGAGAGGCTGTGATATATTTTTATTTTG
TTTTTTATGTTTTAGGTTTTATTTTTAAAAGAGTGTTAAATAAATATGTTGAAAATCGAA
AAAAAAAAAAAA
(1572 bp)

- SilkBase 1999-2023 -