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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38147_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		zinc_finger_protein_558_isoform_X5_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008270 F zinc ion binding
GO:0010804 P negative regulation of tumor necrosis factor-mediated signaling pathway
GO:0019221 P cytokine-mediated signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0043508 P negative regulation of JUN kinase activity
GO:0045453 P bone resorption
GO:0045671 P negative regulation of osteoclast differentiation
GO:0046329 P negative regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:2000660 P negative regulation of interleukin-1-mediated signaling pathway
GO:2000678 P negative regulation of transcription regulatory region DNA binding
Transcript
Level		FPKM:5.50 TPM:5.33
ORF EntryO_SariASG14888_5prime_partial:A_SariASG_c38147_g1_i1
Sequence
(Nucleotide)
GCTTTACCATGTCATGGGTGTTTAAACAAAGAAAAACTATATATAGTAAAAAGTTCCCGT
ATAGCAGAGTTTTATAAACATCTTGTGTATCCTGAGATGCTTGTAAATGAAGATTTATTA
CAATTATGTCACTTTTGCTGTGCACTTCTGCTCAAATATGCATCATTCAGACAGAGATGT
CTAAAAGCTAGAGATATTCTTCAAAATATTACTAAATATGAAATGAACAATATGTCATTA
CTTCATCCCTACACTCATACCAAGATTAACACAATCAACTACCCAGAAACTGAATTGACT
GAAAAAGTCACAACTCACAATGATAAATCAAAGATACTCTATACAAATAATTCATATGAA
ATAAAAAGTACACCAGTACAAGTAAATGAAGTTAAACTTGAAAATGATGTGTTAATAAAA
GACGAAGATTGTGATATTCACACAGAAGAATTATTTCTCATGAATATTGTTAATATAAAC
GAAGAAGTAGATATGAAAGAAGAAAAGGTTAGAAAGGTGAAGAGAAAATCAAAGAGAGAG
AAGACAGCAAAAGAAGTGAGACCAGATATGGAAGAAAAACATAAATTTAAACAAAAAGGG
AAATATTTTGAAACAAAAGACAATATAGCTAACTTTGAGAGGATGTATGATGTTAATGTT
ATAGTTTTAAGTAAAGAACAGCAGATGAAAGATATTGCAGAGAGGAAGAACGGATTTGAT
TATCCATACAGGTGTAATGATTGTTTGAAAGGTTTCATGGACGGGCATAATTTAGAGAAG
CATCGTAAAGCTCTGCATGATCCTAGCAGAGGTGATGCTATCTGTGAAATTTGCAAGGTT
AGATACAGTGATAGCAGAAACCTGAATAGACACCTCCGGAGTCATAGACTAAAGTTTGCC
TGCAGACAGTGTAAACATATCAGTCGCAACACGTGTAAGGCTGTTGAACATTATAAGATG
CATGTCGGGAAACTTTATAAATGTGAATACTGCGCTAAGGAATATTTGTAAGTTATCTAT
CATTATGATTTTTATCATTGGGTTAGATTCTTGGTTCTCAACGACAACGCCCCTTCATGG
ATGTTGGAGAATTTTTAAGGGCAGTAGAAGGTCTAGACAAAATTAAG
(1127 bp)

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