SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38128_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_telomerase-binding_protein_EST1A_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000333 C telomerase catalytic core complex
GO:0000723 P telomere maintenance
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016787 F hydrolase activity
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0043021 F ribonucleoprotein complex binding
GO:0046872 F metal ion binding
GO:0070034 F telomerase RNA binding
GO:0070182 F DNA polymerase binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1904354 P negative regulation of telomere capping
Transcript
Level		FPKM:13.75 TPM:13.31
ORF EntryO_SariASG14838_5prime_partial:A_SariASG_c38128_g1_i2
Sequence
(Nucleotide)
TGGTGGGACAAGTGCGGGAGGTGGGGAGGGTACTAGTACACGTAGGTCCCGCCGCGGCAC
GGGCCGGAGACGCAATCGTTATACAGACGTTCACGGACCTGCAACGGCAGCGCCCGCGCA
TCCTGCATCATCTACACCTACTAATTGGAGAGAGGAAATCTTAGAATCCAAAAAGCAAAA
TTCATACGATAGACACCATGAAAGCGCAAATCAAAGTAACAGACAGAACAGCAATCCAAC
AGAGAAATCAGAATCGACCACATCACATCCTGGGTTGATTATGTTACCACAAAGTTCTAT
TTCTCATATGCAGAAGGAGTTAGGGAGATGTGGACCTTCAGAAAATAAGAGTAAAACATT
GTATGATCACCAAAATCCATCGAAGCCAATTATTGTTCAAACTAGTCCCGCGAAGATGGA
TATGAGATTAGAAAGAGGTATGAAAGAGATGTCATCACGAGTTGCCAGTAACTATGATAA
CAACGAGGCGGCTCGTGCGGCCCGACACCGCGCGCTCCTGCAGGAGGTGGACCGCGCTGA
CGTCATACTACAAGCGCATATGCTAAAGTCTCCCGTAGTGTTGGCCGACCACTGGAGCGA
TCTCAACGATATAAGAACCTTTTTACAAAATGCCCTACAGAGACTCTTGATGTCCGATCT
GAAGTATTGCCAAGAGGATAATGTCGAGCATCATTTTTGGAAAATTTTGTACCACAACTT
TATCGAGTTGCTAAGGAAAAGCTTCCCGCAATTATCACCGGACGAGAAGCCAAAGATTGT
CAAACTTATTAATACTATCATAGACGAAGGCAATACGTATTTCGAGAATCTAGTGCAGTT
ATTAGAGAAGGCTTATAAATTTAACGTGGACGGTTATATAAACGATAATCACGTGACCCC
CCCTAAAGGGTTGGGGTATGTCGGACTCGCTTTGATTTCTGTCCAAAAATTATACGTCTC
TCTGGGAGATCTGGCGAGGTATAAAGAACAGGTCAATGACACTACCAATTACGCTAAGAG
TAAACTTTGGTACACAAAAGCGCAACAGATTAATCCAAAGAACGGAAGGCCGTATAATCA
ACTGGCTATATTGGCTATATATGCTAGAAGAAAATTGGATGCAGTTTATTACTACATGAG
AAGTTTAATGTCATCTAACCCATTCCAATCGGCACGGGAGAGTTTGCTGTCACTCTTCGA
TGAGAATAGGAAAAAGTATGAAGCGGCTGAACGAAGGCGACGAGCCGCAATGGAGAGTCT
AAAGAGCGCGGACAGTTGCAATGATGGATCAGCTGGTGCGGCTGAAGGGTCGCCCACTGG
ATCAGTAGTGGGTAATACACAAGGCAGACACGAGTCCTGGGTTCGTCCCGGTGAACCTCC
TGCTGCGGTGCAACGGGTAACTGCCGACCCACTCTCTACGGTTTCTTCTGTTGAGTTGAA
CAAAAATTTTATCACAAGCTATTTACATGTTCACGGCAAACTTATTACAAAAATTGGCAT
GGAAACGTTTCACGAAAGTGCTAGTCTTATGTTACGTCAATTCCGTGCGCTCCTACACCG
GCAACCATTGCCGATGCCGGGCGCCCGACTACTGCAGTTGACTGCACTCAACATGTTCGC
TGTCGAAACGAATGCTTCTTCACTCAAAGGTGGGAATTCTAATGGAGAACGTACTGGATG
GTTGGAGTGCGCCCTTGGTGTGTCACTACTCATGTTTGGTGCACTTGTTGAGAGATGTTG
TGCGCTTCTACCGGAGCCGATTAATACCCAGCATCATGCAGATGCGTTACTATTACTACC
AGCTATAAAGGTGTGGTCCGACTGGATGTTATGTCACAGTAGCGTATGGAATCCACCACC
GCCTTTCGACAATTTTAATATCGATAACGAAAATGGCCCTTGGGACTGGCTCGCGAATCT
TATGAACATTCTCGAAGCGTTGGATGACAAATCTATAGAATTAGAAAATGAAGTAAAGGA
TGGTTATACATGTGTACGTCTCGCAGAAGATTCTACTTTGGGTGGATTCACCCCCCTCAT
GTACATAGAGCCCGCGCTCGCGTGGGTGCGTGCTGACCCTACGTACAGGCAAACGGCGGA
GCACGTGCTACGGACTAGAAAGCTCCTTTTCTTTGGAACCGAATATCTTGTCGGCGTTGA
ACCTCCAGTCCTTAGGTTGGAGTACCCAGCTGATTCGCCGCCACGCTATGCCAGCGCGGT
ACAACGTGCTCAGCCTAATCACCCGCCTCTGCAACATCTGATGGAGGAATTAGAAGATGG
TGACAGTCCAAGTGAAGTGACAAGCGGAGTGACAAGTCCAAGTGGAGGTGTTGATATAGA
AGCCGAGGGTGCGGATGAAACCACTCGCAGCCTCTTACGTCGCAAAGAACAACTCGAGAC
CCGCAAAGCGACTATAGAACGACATAAACAACGAATGCAGGAGATTCTCCATAGTGGATC
GATAATAACAGAAGTGGAAGTCCGGCCGCGGTGGCTAGTGCCCGATACTAACTGCTTTAT
CGATCATCTGCCGCTACTTCAGAGTGTAGTCGCCGCTCCCTCGCAACCTTACACTTTGGC
AGTACCTCTTGTCGTGATGACAGAGTTAGAAGGGCTGCGCAAGTGTTCGCGGGTGGGGAG
CGCGGCGCAATCCGCGCTCGAGTGGGTGTCGGGAGCGGGTGCGGGTGCGGGGGCCTGTGT
GAGGCTCGCGACGTCCCGCGGATCGCTGCTCGCGTCCCGCGCGTTCACAGCGGAACGCGA
TCACGAGCGCGTCACCAATGACGACCGCGTGCTCGCGACTGCATTGAACCTGCACGCAAA
CCTTGCCGCCGATACAGACACTCGCCCTGAAGATGGTGGTGGTGATTCTTCCAAGAGTAT
ACGACGCGTTCGCGAAGTGGTGTTACTAACAGACGATAGGAACTTGCGCGTGAAGGCTCT
AGCGGCCGAGATGCCCACGCGGGATCTTCCATCCTTCGTTCAATGGGCTGGCTTGTGCCC
TGATGCTAAGATAAAAACGCAAGACGTTCCACAAGATGACACCACTGCCGCTTCTTAAAT
TACCGGTATATGGAATTCTTCAATAATACAATGTTTGAACACTTTCACAGCTACGTGAAA
ACGGAGGCAAACCAATTGGATCTATAAAATGAATTAATACAAGTTTTCATACAAGCGTGC
GCTAGACTTACACGCATGCGTCAGACTTAAGCGCGTGCGTCAGACTTACGCGCATGCGTC
AGACTTACGCGCATGCGTCAGACTTACGCGCATGCGTCAGACTTACGCGCA
(3291 bp)

- SilkBase 1999-2023 -