SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38045_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		tetratricopeptide_repeat_protein_21B-like_[Helicoverpa_armigera]
Ontology
GO:0000790 C chromatin
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
GO:0097542 C ciliary tip
Transcript
Level		FPKM:9.97 TPM:9.66
ORF EntryO_SariASG14653_5prime_partial:A_SariASG_c38045_g1_i4
Sequence
(Nucleotide)
ACGTGTGCTCTTCCGATCTTACCGCTTTTATACCTGTTATCGGCACAGTTAAATGTGAAG
AATTCTACTCATGCTGTTGCATTTTTAAATACGGCATATGAAACCAAGATAAGCTACTCC
AATCGTAATCCATTCAGTTTAACATATATAAAAGATCTGGATCCAGATTTTCTACTTGAA
GTATACAAAGAATATAAGAAGCATTTACCTAAGAAGCCATATGTTATTGTCGGTTATTTA
GTTTATAATCAAGAAGGAAATGGTGAAATGATTAGTCACTGTTTTAAAATTCTAAATACG
GTTCGTGAAGCTTGCCCTGGATTAATTCCAGCTTTATATGAGCTGGCTAAATTGAAGTTT
CTTTTTGGCTATTCAAATGATGCTCAAAAGTTAGCGCAACAAGTTGCCGAACTAGACGGT
ACTCATGCAGGCTGCCAAGTGTTACTGGCACAAATATACATACAACAGCAATCATTTGCA
AAAGCGGCACAGTGTTTAGAAATGTGTTTAAGTTATAATTTCAAAGTACGAGACAGCTCA
ATGTATCATTTTCTAAATGGAGTAATTTTGAAGAGTACCAATCAGCTTGAAGACGGCTTA
ACGAGTTTTATAACTAGCTTACAAATAGCGACGAGTAAAAGCAATCTTATTAATACAAAT
AGGATGTTTGAATCAGATTTGAATATCATTGATAAGGCGACTCTGTATGTGCAAATTATA
GAAATCCAGACTATATTAGAACAATATGGTGAAGCAGAGAAAACTATGCAGGAAGCGATT
CAAGAGTTTTCCTACACTTCAGAAGAGAATCGGCTTTTGATCACTCGTGCAGACTTAGCG
ATGAAGAAGGGAGATATTGATAATTCTATTGATATATTAAACGAGATAAAACCAGAGCAA
CCGTATTACTTTCAAGCTCATAGTAAATTGGCGCATATTTATTTGAAAGATAAAAAGGAT
AGAAATATGTTCACTTCATGTTTCAAAGATATCGTTAGCAATCATCCGATGGCCGATGCT
CATACTATGATGGGAGATGCCTATATCTCTATTCATGAGCCCGGCCAAGCCGCAGAATCT
TATGAAACAGCACTTAAGGGTAATCCTAAAGATGTTCAACTAATAAAAAAACTTGGTGTG
GCTTTATTCAAAATGCACGAGTATGACAAAGCCATACAGCATTATGAGAATTCTATTAAA
CTACTTAGTGATGATGAAATCATGTTTGAATATCTTGAACTTCTGATAAAGCTTAAAGAA
TACGATAGAGTCGATTCGACAATATCGTCCGAGTTAAATCAGAAGCACAATAAGGAAAAG
GGCATCGACACGTTGAAAAGGCGCGTTCGTTTGCTTCTTCTACAGACTAAAAGTCGTGAA
CTCAAGGATCCAATCGGTGGAAATGTCAATTTGATATTGGCCGAAGCGAAAGATTTACAA
AATACAATCGTTAAAAGAATAGAGATTGACTCGAGAAGTGATCTTCCGGAGGAGAAGAAT
CGGTTATCTTACATATTGTGTGCTTTGGCGAGGGTCAAGTCCACAAAGGAACCGGCAGTC
GCCGTCAATCTCTATTCTGAAGCTTTGATACACACGCCCCGGGAATCGAACACACTGTTG
TCATTGGCTAAACTGTATGCACATATGAATAATCCTGAGAAATGTGAACAGACGTGTTCA
ATACTTTTGAACGCGGATCCCAACAATGAATCGGCAGCGGTGATGATGGCAGATCTTGCT
TTTCGTAAGGTGGATTTAGAAGCGGCACAACGTCATCTGAATCAGATCCTATCAGTGAAG
TCTACAAGCTGGGAAGCATTAGCACAACTAGTAGAGGTGCAGTGGCGACGTGGGAAGTTA
CTTGAAGCGGAACAAATGCTGGAAACTGCTAGACTCAATATGGGGAAAAATGATGATCCA
GGATATCATTACTGCGCGGGTCTGTGTTCGATGCACGCGGGTAGGGCGAACGCAGCGCTG
CGCCAGTTGAATCAGGCTCGGCAGTGTTCGCGCTGGGCGACGGACGCTGCGCGGCGCATG
GCTCTGCTGTGCCTAGCGCAGCACGCGGCCAGGGTCAGCACTGACACGACACCCGGCAAC
ACACCTGCCGCTGCAGACGACACGGATACGAAACTGCTTGCGCTGAAAACGGCGGAAAAG
CTTGTGTTAGAGGTAGCACCGGGTGATCGCAAGTCGCTTCAAGCGCTAGTACAATTGGCG
ACGAAGCAGAAACCGCTAGCGGAACGGGTCCTGCAAGAACTGTTACCGCTGGCGACAGAC
GACGGTTACCAGGACGATCCCTATATAATATTGGCTATTGCGAACGCTTACAATATCATC
AAGCAACCGACTCGCGCGAAAAATATACTAAAGCGAACTGTATCCTCGATTCCATGGACA
CCGGAGAAGGCGGATGCCTTAGAAAGATGTTGGTTGGAGGTCGCAGACGGACAAATCGCT
TCGGGTAGATTAGACGCAGCGAAAGAATTACTCACTAAAATCTTAAACCACAATAACTCT
TGTGCACCCGCTTATCAATATCTAGGTCAATTAGCAGAAAAAGAGCAAAACTATAAAAGT
GCAGCACATAATTACGACAACGCGTGGGCGTATGGGGGGAAAAGCGATCTAGCGGTCGGC
TACAAGTTGGCACATGCCTATCTGAAGCTGAAGAAATATCCAGAGTGTATCGTCGTTAGC
CGGCACATACTCAAACTTCACCCGGATTACCCGAAAATAAGAAAGGAGATATTGGAGAAA
GCCAAGACTAACTTAAGAACTTAATATTTGCCATTCCCTTCTTAAAATTGTCTTACACAG
GGAAATGTTAAAGATTTTAAAAATTGTAAAACTAATGCACTAATATGTCTACAGTCAGGA
GTTTTTGACGGCGCCTTGATTTATCATATAATGGTTATTATCCTAAACTTGCAATATTTG
ATTTTATATTATATAATATTGGTTGCATTTGTACATTATTTCGTTTAATTGTTGTCCTAA
AGTGCGATAGAAATAATGAAATGTGACATGAATTCTGCGGTGCCACAAAAACTCCTCGGA
ATGTTTTAGCAAAGTGGCAACGTTTATCTAAAGCGTTGATCTAATATTCGAACGGCTGCT
TTGGCTGTATAATCTAAGTGCCTTTGCCTTAAAAGGGAAAAAAACATGAACAGTTGTCAC
AAATAACAGGAATGAAGCATAGAAAATAATAGGAGTTTTTGGCGGGATTTAGTGGTTACT
TTTTGTAATTCATTAAACTTATGTATTTAACCGTTTCATGTAATCTTGGTGGCGTTTTAT
ATGATATAGATTGGATATAGTGTTCAAGTTTAATATAGAAGATAACGCGTAATGTTTATT
CTGAGGTGCTGACAAGGATCCATGGAAAGTTCTAGTAGTATGAGCCACCGTTTCTCTAGA
GCTTGGTAACGCTGATACAAGTTTAAAAATATATCTTACCCACATGACACTGGCACAAAT
T
(3481 bp)

- SilkBase 1999-2023 -