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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37881_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		transcription_elongation_factor_SPT6_[Bombyx_mori]
Ontology
GO:0000176 C nuclear exosome (RNase complex)
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0008023 C transcription elongation factor complex
GO:0030707 P ovarian follicle cell development
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
GO:0035327 C euchromatin
GO:0035363 C histone locus body
Transcript
Level		FPKM:18.77 TPM:18.18
ORF EntryO_SariASG14356_complete:A_SariASG_c37881_g1_i1
Sequence
(Nucleotide)
CATAATTTAGAAGTTATTGTACATTTTTTCACAGTAAAACTTATAAAATTACTTGTTATC
CATTTATTTAGTGTAAATTTTAGGTAGCTGTTTGTTCAACCAAGGTTGACAATGGCAGAC
TTTATGGATTCAGAAGCTGAAGAGAGCGAGTTGGATTCTGAAGACGAAGATCAGCCGACA
GAGCGCAAGAAGCCGAAACGGAAAGCAGCGGTACAGAGTGACGATGAAGACGAAGAAGAA
GAAGATGATGAAGAGAGACTCCGTGAAGAATTAAAAGATTTGATTGATGATGCACCAATA
GAAGAATCTGGTAGTGATGGAGAAGACTCAGATGCTAGTGCAGGGCCGAAAAAAAGAAAA
AAAAGTGATGATGAGTTAGATGATAGACTTGAGGATGAAGATTATGACCTTATAGAGGAA
AATCTTGGTGTAAAAGTTGCGAGAAACAAGTTCAAACGTTTGCGTCGTTTGGAGGAAGAT
GATAGTGATAATGAAGGTGGTGATGATCCTGACTTAGAGAGAGAAGTTATAGCTGAGAAG
CTTTTCGTTGGAGGATCAGATGAGGAAGATGAGAATCGTTCAGAATCAGCAGCGCCTCGT
GAGGTGGAATATGACGACGACAATGAGGACATGGAATCAGACGCTGATGATTTTATAGTC
GACGACGACGGTAGACCTATAGCTGAGCGAAAGAAGAAACGTAAACCGATATTTACTGAT
GCGTCACTCCAAGAAGGTCAAGATATATTCGGTGTTGATTTTGACTATGATGAATTCGAG
AAATATGGTGATGAAGATTATGATGAAGAAGATGAGGAAGACCTGGATGAGTATATCGAA
GATGAGGAAGAAGAAGGTGAGAGACGTCGAACTAAAAAAGGCAAAGCTAAACGGCCAAGC
AAGAAATCAATCTTTGAAATATACGAACCTAGTGAGTTGAAACGGAGCCATTTTACTGAT
TTGGACAATGAGATACGTAAAACTGATGTACCGGAGCGAATGCAAATTCGAGAGGTTCCA
ATAACTCCAGTGGAAGAAGGCAGCACGGAACTAGAAGATGAAGCTGAATGGATCTATAAG
CAGGCATTTCTGAAGCCGTCTGTTTCGAAGCCAGATTCTCAGGAGACAAGAGATAGATCA
CGAAGAGGTTCAAGTACAATAACGAAGATCCGTCAAGCGTTGGATTTCATGCGGAACCAG
ACTCTAGAAGTTCCGTTCATAGCATTCTACCGTAAGGAGTACGTTCAGCCGGAGCTTAGT
ATCAATGATCTATGGAAAGTCTACAAATATGATGCCAAGTGGTGCCAGCTGAAGCAACGT
AAGGAAAATCTACTCAAGCTATTTGAGAATATGCGGGAATTTCAACTGGACAAAGTGATG
GAAAACCCTGACGCACCGATACCTGATAATATGAGGCTAATTAAAGACGAAGATATAGAA
AGGTTGAAAAATGTTCAAACACCGGAAGAGTTGCGCGATGTCCATACGCATTTCTTACTG
TATTACTCGACTGAGCTACCCGAGATGCAGAAAGTTGCGAGGGTGAAAGAGAGGAAAAGG
GAATTGGAAGAGAAAAAGAGATTAGCTCGCGAGGAAGCCGAGAGGAACGGTGAAGATGGA
GAAGAAGCCGTGGCAGCAGTGGAAGCGGCAGAGCCTGAAGAGGAAGAGCAGACCGAAATC
AAGTACGCGGTTAGGTCTGGACCGTATGAACTCTGCAGGAAGGCTGGCATCGAGCCGCTG
GTGAAGAAGTTTGGTCTGACTCCGGAACAGTTCGCTGAGAACGTACGGGACAACTACCAG
CGGCATGAAGTGGAACAGCAGCCTGTGCCGCCGCTCGAGGCGGCCGCTGAATACGCAGGG
GCAATGGGTTCAGCGGCTGAGGTGGTCCGCCGTGCTGTTTACATGTGCGGGGTTCAATTA
GCTCGGGAACCTTCGTTGCGGGCTACCCTTCGTGACGCGTTGAGAGAGAGGGCCACTATT
ACTATCAAACCTACCAGTAAGGGTATCAAGGAAATCGACGAAAGCCACGCCTGTTACAGT
TTAAAATATATTAAGAAAAAACCAGTTCGCGACCTTACTGGAGATCAGTTCTTGAAGTTG
ACGATGGCCGCTGAAGACAAACTCTTAGAACTAAGCATCAGCGAACAGATTGAAGGAAAC
ACCGGACCCAGCTACCTCGAGGAACTCAAGCAGTTGTACCAAAAGGACGAATTCGCCGCA
ACGGTGGAGGCGTGGAACGAACTACGTGCCGAAGCGGTCACTATTGCCCTTAACAAAATA
GTGATGCCCGAATTAAGAAGAGAACTGAATGCTGTACTACTTCAAGAGTCTAAAGAATAT
GTTTTAAAATGTTGCCGTCGACGTCTATATGACTGGTTGAAAGTGGCTCCATATGATTCA
CGTATATCAGATGATGATGATGAAGAATGGGACGCTTCTAACGGTCTCCGCGTGCTCTCG
ATCGCGTACGTGCCGGACCGGACGCACTCTGCGTTCGCGTGTATTGTCGCCGCGAGTGGC
GAGGTGGCCGACCACCTGCGTTTGCCGCACCTCCTCTCCCGGCGCAACGCTTGGGACGCG
CTCGAACGACGCAACAAGGAGGCCGACATGACCGCACTCAGGAAGTTTATATATCGTAAG
AAACCTCACGTGATAGTAATAGGTGGCGAGTCCCGGGAAGCTCTGAATGTAAAGGCGGAC
GTGTCCGAATGCGTCCAGCAACTGGTAGAGGATGAACAGTTCCCAAGGATACCAATAGAG
ATAGCTGATAACCATATTAGTCAAATTTACAGTAACAGCATTAGGGGAAAGAATGATTTC
AGAGAATACCCTGATGTTCTACGTCAAGCCATATGCCAAGGTCGACTCCTACAGGATCCT
CTAATGGAGATATCACAGCTATGTGGTCCAGATGAGGAAATATTGTGTTTCCGATATCAT
CCCCTACAAGATCAACTGGCTAAAGAGGACCTACTCGAAGGAATCGAACTTGAGTTCGTG
AATAGGATAAACGAAGTCGGCGTTGACGTCAACGAGGCGATACTGACGGGACGTGGTACT
GAACTCTTGCAGTTTGTATGCGGCTTAGGCCCGAGGAAAGCCCAGGCATTAATAAAACTC
TTCAAACAAACCAATCAGAAACTGGAGAACAGGACGCAGCTGGTGACAGTGTGCCACATG
GGACCGAAGGTGTTCATCAACTGTTCAGGATTCATCAAGATTGATACCAGCAGCCTCGGT
GATAGCACTGAAGCTTATGTAGAAGTACTAGACGGTTCTCGAGTACATCCTGAAACGTAC
GAATGGGCTAGGAAAATGGCCGTCGACGCTTTAGAGTATGAAGACGAGGATGCCAACCCT
GCAGGTGCCTTAGAAGAGATCCTCGAAGCTCCGGAGAGACTGAAAGATTTGGATTTGGAT
GCGTTCGCTGAGGAACTGGAACGTCAGGGTTTCGGTAACAAGAGTATAACATTGTACGAT
ATCAGAGCGGAATTGAACTCCAGGTATAAGGATCTCAGGGTACCGTACCGTTCCCCCACA
CCGGAGGAAATGTTCAATATACTGACTAAAGAGTCACCGGAAACCTTCTACGTTGGGAAG
ATGGTGTTGGCTTCGGTTATGGGTATAACGCATAGGAAACCTCAAAGGGAGATGCTCGAT
CAAGCGACACCCGTGAGGAACGATAAGACCGGATTGTGGCAATGTCCTTTCTGTTTCAAG
AATGATTTTCCGGAATTATCTGAGGTATGGAATCACTTCGATGCAGGCACATGCCCCGGA
CAAGCAACTGGTGTCCGGATAAGGCTGGACAACGGTCTGTCCGGGTACATACATATAAAG
AATTTATCGGACAAACACGTCACAGATCCTACGGAGAGGGTCAGGATAGGACAGACTGTG
CACTGTCGCGTACTAAAGATTGATGTGGAACGGTTCTCTGTGGATTGTTCCTCTAAGTCT
TCGGATCTGTTGGATAAAAACAATGAATGGAGACCACCGAAAGATCCGTATTACGATCAA
GAAGCCGAGGACAAAGATTTACGTAAAGAAAAGGAAGCGAAACAGACCAAAGAACGGATG
CAGTATGTGAAACGGGTTATAGTGCATCCGGCGTTCCATAACATATCGTTTGCGGAGGCT
GAGAAGCTAATGGACAGCATGGCCCAGGGCGAGGTCATTGTGAGGCCTAGTAGTAAGGGT
TCTGATCATCTTACCGTGACGTGGAAGGTTGCTGATGGTATTTACCAACATATTGACGTC
CGGGAGGAGGGCAAAGAAAATCAATTCTCTTTAGGTCGAAGTCTCTGGATACAGGGTTCA
GAGTTCGAGGATTTAGATGAAATTATAGCACGACACGTGACGCCGATGGCGGGACACGCG
CGCGATCTCATAGCGTACAAGTACTACAAACCTCTCGGCGGAATGAGAGACAAGGCTGAA
GAAATTCTAAAGGAGGAGAAAGCTAAAAACGCCAATAAAATCCACTACGTCATATCGGCT
GCCAAAAATTACCCCGGCAGGTTCCTGTTGTCGTACCTGCCGCGGTCGAGATGTACCCAC
GAGTATGTCTCTGTTACGCCCGACGGGTACAAGTTTAGGCAGAGAATGTTCGACTCTCTG
TCTAGTTTACTGAAATGGTTTAAGGAGCACTTTAGAGACCCTCCCCCAGTGGCCACGCCC
GTACAGCGTACGCCGGCGTTGCGTACGCCGCACGGCGGGATGACGTCCACTATGTACCAC
ACGCCCGCCGCGCACACGCCCGCGTTCCACACGCCGGCGCACACGCCCGGCCCCGCCTAC
ATCAACACGCCGTACACGCCCTCCGCTCAGACGCCGTATATGACGCCGTTCGCGACGACG
CCACGTCAGCCGGACTTCCTGACGCCGGCGGCGCCGCGCCACAAGCCGGTGCCGATACCC
GCGTACACAGAGCCGGCGGACTGGCAGAAGGCGGCCGCTGACTGGGTGCGGCACCGGACC
TCGCGCGACACGCCATCCACGCCGCGCAGTAGCGAGGGCTCCGTGACGCCGCGACACTCG
TCCCGCACGCCGCGACCCGACTCGCGCTCGACCCCGCGCCACGAGTCGCGCTCGACCCCG
CGGCACGAGTCGCGCTCCTCCTCGCACGGGCATACGCACGGTCACTCGCACGGCCACTCG
CACGGCCGGTCGTCGCGCGCGCATTCCGTGCGCTCGACCCCGCACACGAACACGTCGCCG
CGCTCGATGTCGTTCGGCGACGCGACGCCGCTCTACGACGAGAATTAGACTGATTGTGAC
GCGATCACTCATGTATTTTTGTATATAGGTCGCGGTGCTTGTTGCCCAACACGTGCGGCT
TCGATTTCGTGTTTGTATTGTCGGTGAAGCGTGCTGGTTAGTCCACGCTGAGCTTTGTGC
TCACTTAGCCTTTGATATTTTATTATTTGGTCAGACCTCGCGATCAACTCGATCGGCTCT
TGATTTGTTACTCGTAATAAATAAACGTAAAGTCTGCTAAACATCTACGATAATTTGAAA
TAGTTATGCAATTTTATGTATACTCAGAGTCTTGAGATGCGTGAAATATATTTAAAACAT
TATATTCTAAAATAACACATAAATTATCTAAATTAAAAATATAATGCTGTTAATACACGT
ACGGAC
(5646 bp)

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