SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37824_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		uncharacterized_protein_LOC110381188_[Helicoverpa_armigera]
Ontology
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0036245 P cellular response to menadione
GO:0043069 P negative regulation of programmed cell death
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050072 F m7G(5')pppN diphosphatase activity
Transcript
Level		FPKM:0.11 TPM:0.11
ORF EntryO_SariASG14258_complete:A_SariASG_c37824_g1_i2
Sequence
(Nucleotide)
CTCAAAATACTATCGAGTTGGCTTCAAAATACTATCGGGGGCAGAAGTATGACCGTGCCC
GTGGCAGAACCATTCAGATATGTCCAAATTAGCCGTCGGAAGCTCTAATATTCTGCCAAA
TTCTATTGAACCATCAGATATAATGTTAGAGCAATTCGAACAAGTCAATTTAGCTTCACC
CCCAACACTGATGTTTACCTTTAATTTAACAGCCTCCGAATGCTTTTGTACACCGTTCGC
TGATATTATCTCCTTATAAAAATTACCACCATCTTTCGGTTCGGTTAAAATCCTGAACGA
TACAGTATTCTCATCAATTTTAAGGCATGACATAGAATTCGGTATAACTCGGCAGAATTC
TGCCATTTCAATTGTGGACGAGAAATCCATTTCATCATCAGAGTAACAATCGGAGAGGCT
CTCAATAGAGGATAAACTATCTCGTCTCAATGATTTGAAATTCTCGTTATAATAGTTGAG
TATAATACAATTTGTCTGAATGCTAATTTTCAAATTACATTTCTTTGTAAAATCAGTAGC
GGTTCTTATGAAAACGTTGCAACTACGCAGCCTTGAGCGGAGCTCCATCAGAACACTTTC
TACTAACATTTTCACTTACACACAACTAATCAAACTATACAAAACTATTTAACAATCAAA
TCACCATCTGATTTGATCCTATTAACATGACCATTGGTTTCGTAAACATTGAATAAATTG
TCCATCTCTCTTAAAGTGTATGGTAGAGTTGCTTTTTTATAATAATCACTCGTCATTTCG
ATGTTATCGATGACAGTGTCGAGGAGATGAGATTTCTCTACATAGATGCCGGGGGCTTCG
TGTTTCAAGTAAGTGAAATGAATATGTAGATGATAGAACGACGGTTGGTAATGCAGGTAA
ATACGCAGCTGACTTCCGGGCAAGTTGTACTTATCTGATATGATTTTCTAAAACAACACG
TAAAAACCGTTATGCACTTTGATAATTTACAGAAATTTCATTTCTATGATACATTTCGCA
CCTTCAAAATGTAACTGGCTCAACTGAAAAATCGAGATATTGAGTTTTTACGAGTCGTAA
AATAACTCTAAATGGAACATTTCAACTATCGTTAATCAACTTAATTATGTTTAAAAAACA
TGTTCAAATCATTTTTTATGAAACTATACAAAAAAAATTTTGATGAACAAAACCAAAACA
AG
(1202 bp)

- SilkBase 1999-2023 -