SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37823_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		phytanoyl-CoA_dioxygenase_peroxisomal_precursor_[Bombyx_mori]
Ontology
GO:0001561 P fatty acid alpha-oxidation
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0006631 P fatty acid metabolic process
GO:0006720 P isoprenoid metabolic process
GO:0016491 F oxidoreductase activity
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0048037 F obsolete cofactor binding
GO:0048244 F phytanoyl-CoA dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0097089 P methyl-branched fatty acid metabolic process
Transcript
Level		FPKM:18.55 TPM:17.97
ORF EntryO_SariASG14257_complete:A_SariASG_c37823_g1_i2
Sequence
(Nucleotide)
CCTAGGTATTGTTTTTTCTTTATTTTTTCTTTTATCTTGTAAATGTCTTCTTGTAAAAAT
AGACGTCATATCAGTTGTAAACATTTATTTTATAAAAGATAATTTTCTTTTTATTATAGT
TATTGTAGATAATAATTATTTACGTATTTTATATATTACGTATTTGTCATATTCACTGGA
TACTGTTTTTCTACAAAAAAAATTGTGAAAATAAGGCGAACAATGAATAATAAATTAATT
AAATTGTATCCGGACAGGTTATCTGCAGATTTACCACAGTCATACAAGCTTTCAGAGGAA
CAGCATAAATTTTATAAGGACAATGGATACTTGGTTATTAAGGAGCTGATAGACTTTTCG
TCATTGTATAGTTACAAGCAACGTTTTATTCAAATATGCAAAGGACTAATCGATTCCCCA
GTCACTGTGGTGAAGGAATCCGGTTTAATTGGCAAAAACCTAAAACCTGAAGACTATATT
AATAAGGTCCAGGAATTGCTTTATGATGATGTGTTTATTACTTACGGTGAATATCCGCGA
ATGTTGGACATTCTTAGCCAGTTGATAGGTGATGATATCACCGCTGTAAATAGCATTTTC
ATCAACAAACCACCGGGGTCTGGAAGGCATCCACCTCATCAGGATCTCTTCTACTTTCCA
TTCCGTCCAGCGGACAAGATCATTGGCACTTGGACAGCGGTAGACCACGTCTATCAGGAC
AATGGTTGCCTGTACTTGATACCGGGGTCACACAAAGCGGAGACACTCTACCCGCACGGC
GACGTACCGGATGCCGGTAAATTATATCATGGTATACTGGATGAGAATACTCATGCGCCA
GTGAAGGAGAGAGTCTACATGGAGATGAGCCCAGGAGATACTATATTCTTTCACCCTTAT
TTAGTGCACGGATCTGGACCTAATATTACGAAGAGTTACAGGAAAGCGATAACCTTTCAC
TTTGCTAACAGCAGTTGTGAATACATTGACATAACCGGGACCATGCAGGAGGTCGTCGCT
AGGGACATAGTAAAAGCCCTCTATAATAAAGGGTTTCAAGGTGTCACTTATAAGGACATA
TGGATATACAAAAGTAAACAAGTCAAAGGCGTCAGATCGAAATTATAAGAAAACATCCTT
AGAATATTCCAGAAATAAGTTAATATAAAAAGAGATTTGTATTATAATTATATGTTATGT
ATAGAATTATAAAAGGGGTTTAAGAGAGAGGGC
(1233 bp)

- SilkBase 1999-2023 -