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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37790_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		splicing_factor_3B_subunit_2_[Helicoverpa_armigera]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016032 P viral process
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:37.72 TPM:36.53
ORF EntryO_SariASG14171_complete:A_SariASG_c37790_g1_i1
Sequence
(Nucleotide)
AAGCAACAAAGAATAAGAGAAAAAAGAAGAAGAAGAAGGCAGCAAAAAGCAAACGTAAAG
AGGATGCGAAGAAAAAAGAACTTAATTCCAGTCAGGATGAAAAAAGAAAGTCAAGCAACA
AAGAATAAGAGAAAAAAGAAGAAGAAGAAGGCAGCAAAAAGCAAACGTAAAGAGGATGCG
AAGAAAAAAGAACTTAATTCCAGTCAGGATGAAAAAAGAAAGTCAAGTGACAAAGAAAAC
GAAAAGGAAGCCACTATAGAATATGTACAAGAGAATATACAATTCCATGAATTGGAACCG
ATGTATAGGCAGTTTCATAGGATATTTGAAGCTTTCAAAATTACTGAAAAAAGGGATGAT
AGTATCAAAGAGGAAGGGAAAGATGTACCGAAACCTTCCAAACCGCAGGAGAAAGTACAG
GATCAGTTTGCTACTGATGAAGAAGCAGTTGAGAAAAGTGCAGCGGATGAAAAAGAAAGG
CTGTCTAAACGCAAATTGAAGAAGTTGTCGCGTCTTTCTGTCGCTGAGCTGAAACAGTTA
GTGCCTCGACCGGACGTCGTCGAGATGTATGACGTCACAGCGAGAGACCCAAAGCTGTTG
GTGCAGTTGAAGGCGCACAGGAACACCGTGCAGGTCCCACGGCACTGGTGCTACAAGAGA
AAGTATTTACAAGGCAAGAGGGGCATAGAGAAACCTCCGTTCGACTTGCCAGACTTTATA
AAGAAAACCGGAATAATGGAAATGCGAGCCTCCCTCCAAGACAAAGAGGAAACTAAAACT
CTTAAAGCGAAAATGCGAGAACGCGCAAGACCAAAGTTGGGTAAAATCGATATCGATTAC
CAGAAACTCCATGATGCGTTTTTCAAATGGCAAACGAAACCGCGCATGACGATACACGGT
GATCTGTATTACGAAGGGAAAGAATTCGAGACACGACTCCGTGAGAAAAAACCCGGTGAC
CTCTCGGAGGAACTGAGGACTGCCCTCGGTATGCCAGTCGGACCAGGATCACATAAAGTA
CCACCGCCATGGCTGATCGCTCAGCAACGTTACGGACCACCACCATCATACCCCAATCTG
AAGATACCAGGTCTCAATGCCCCTATACCTGAAGGATGTGCATTCGGCTACCACGCCGGC
GGTTGGGGTAAACCACCCGTCGATGAGCTGGGCAAACCATTGTACGGAGATGTATTTGGG
CATCAGAGCAATGGCCAAGATGATCTAGAGGATCAAGACATAGACAGGACAATGTGGGGT
GAACTGGAATCGGAATCCGAGGAAGAATCTGAAGAAGAGGAATCTGGTGACGAGGGAGAG
AAAGCTGGTGAGCAAGAGGTGCCCACCGGGCTGGTGACTCCTGGCGACGGTCTCGTGACG
CCGCTCGGGCTCAGCTCGGTGCCACCGGGCATGGAGACGCCGGACACTGTCGAGCTCAGG
AGGAAGAAACTAGAAAGCGACATGGAAGGTGATGATACCCCGGCACTGTACCAAGTGGTG
CCGGAGAGGCGGGTCGGCCTCACCTCAGGGATGATGGCCTCTACCCACGTGTACGACATG
AGCGCCGCTAACCCCGGTAAGCGCGCCGGTGCAGTAGCGGAGAGCGGTGTGGTGAGTGGT
GGCGGAGGCGGTGCTGGTGGTGGTGGTGGTGGGGTGGGCGCGGGCGGTGTGGAGGTGGCG
CTCGACCCCTCGGAGCTGGAGCTGGAGCCGGAAGCGGTGGTGGCGCGGTACGAGCGGCAC
TTGCGGGACCAGCGGCCCCGGGACCATGAGGACCTGTCGGACATGCTCGCGGACCACGTC
GCCAGGCAGAAGAACAAGCGGAAGCGACAACAAAACACAGACTCAAAACAAACGAAGAAA
TATAAAGAATTCAAATTCTAAGAGTGACTTTAGTTATAAATGTTTTCGCAAAATAAATAC
TTTCAAAGAGTATGTATGTGTTATTTTAAGTGCAAGTAATTAAAGTTCTTTTAACTTAAT
GTAGG
(1985 bp)

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