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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37756_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_2-like_isoform_X4_[Amyelois_transitella]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0070742 F C2H2 zinc finger domain binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:24.31 TPM:23.55
ORF EntryO_SariASG14100_complete:A_SariASG_c37756_g1_i1
Sequence
(Nucleotide)
TTTTTAATGGCAACGCTGCTTGTACGACGGCCATAAAAAATCAAAACGAAGCAATTCAAC
CAAGATGGTCGTGTCGTATTTTTAATGCGATAAATATTTGTAATGTGTAAATAATCAGAC
AGCATGTATAATGGAATTGGGTTGACGACACCCAGAGGTTCGGGAACTAATGGATACGTG
CAAAGGAACTGGGCATCAGTGCGCAAAACCAAAGATTCTGTGAATTATCGTACCGAAGAA
GAGATTGCTAAATTGGACTCTTCTGCCATCAAGCAACCGAACCAAGAAATACTTGATCAC
GAGAGGAAGAGAAAGATTGAAGTAAAATGTGCAGAACTTGAGGATAGTCTTGAAGACCAA
GGGTTGCCGAAGGATGAGATCGCTGCGCGTGTTGCAGCGTTTCGAGCGAAGCTCTCTGAA
ACCAGCAGCGCTGAGAAAGATGTACCAAAGGACGAATTCGGCAGAGTAAACGTAAGGGAG
ACGCACGCGGTGGCAGAAGCGCAACAGGAGAAAAACGCCCGTCTGCGCGACGCGTTCGGG
ATATCGCCGCGCTTCGTCGAGGGTACAAGCCTCGATCCCGAACGGAGGGCGAGGGAGCAC
GCGCAACGGTACCCTCTCGTGAGGACACCCAGCCATGAGAGGGAGGATCACGACTCGCAT
ACAGCTAAAAAGAAGAAGAAGCGAAGTATTTCTCCAGAAGCTAAAAAGTTGAAAAAGAAG
AAATCGAAAAAAAATAAAAAAGAGAAGCAAGATTCTAGCAAGAAAAAGAAGAAGCGTTCT
AAATCAACGGATACAGAAAGCTCGAGCAGCATCGATCAGGCCCACGAAACCGATACCGGT
GCTACATCGGAAGAAGAGAAACAGAAGAAAAAGAAGAAGAAAAAGTCGTCTAGCAAGCGT
CGCGTCAGTACCGAGCGCTCCAGTGTCGAAAGTTCACCGGTTAAAAAATCAAAAACTAAA
CAACGAGAACATTCAAGTGAGGCGACCGACGTTCCATATAGAAAACAGGCAAATCGGGAA
CAAAGCGATCGAAAAGACTACAAGAAACAAGACCAAGCGTCTATCAGGAACTCACGACGG
AGTGAATCGAACAGAAGACGCGCGGAGCGAAGTAGTTCCAGAGACGAGCGTGACTCCTCC
ACTGAATATAGAACAAGATCTTACATCACAAAAGTGGATAACAGGAAACAAAATCGAGAT
TCGTCCAGAGAGCCGGCAGGAAGATCAAAGGATACCAAACGCTCTCAGCGTGAAAGTCGG
TATCACTCTGACTCCGATCCCGCAGAAGAACCATCCATAAGTAGACCAGAACAAAAAAAT
AAAAAACGTCACAGGGAGAGTACTTCATCACCACCACCCGAAAAACGACGCCGCAAAAGC
TTATCCCAAGATTATAAAAAAAAGAGTGAAGATAATTATGATAGTAGATTTGTAGCAAAA
AATAGAGACCGCGATCGAAGAGAAAGCTCCACGCGAGATGATAGAAGAGTGTCAAGAAAA
AGTGAGTCGCCTGATTACAGGAAAAAGAAAGATGATAAACATACTAAAAGAGATAAAGAA
ATCAGATCTGAGAAAAGGAATAGGAGCGAAGATATATATGAAGAATCATCGCATAAGATT
AAAGGAAAAGATAAACGGAACGATTCTAACACCAGAAGAAATAGAAATCAAGAAGACTCT
TCACCGGAAATAAGAGAACATTCTCCAGCAAATAAGACTTACAAAAATAGAGACATACGA
CGGAAAGAGACTGTAAAAAAATACAAAACGTCAAGGTCGGATAGGAATTCCTCGGTATCA
GAATCTGAATCAGAATCCCTTCAAAAAGAGAAGGTAACGAAAGGTAAATTAAAATACCGT
AGAGAAAATACTGGATCACCTCAGTATAGAGAACGTAAAATTAGTCCTTCCGTAGAACAT
AGAAGAAAAAGAAGCCTTTCTCGAGACTCGAGAAGGAAAAGGAGCGCGTCTTCGGAATAC
ATGCGTAAGCAGAGACCAACTCCAGAGTATAAGACAAAAAGAAGCCCTACCTTAGAAAAT
AGGAGGAAAAACAGTCCGGTTTCAGATAACAAAAAGGGAAGGAGTCCATCTGTGCATGAC
AGAAGAAAAAGAAGTCCATCACCAGGAAATAAAAAAAGGAATAGTCCATCTCCCGAACGT
AAAAGAAAGAGAAGTTCATCTCAGGAAATTTCCTCCAGAAGAAAAACGAGTCGATCCCGA
GATACTAAAAGTAAAAAGAGTCCATCGGTGGAAATAATAAGAAAAAATAGCCCTTCACAG
GAATATAAGAAAAAATTGAATCCTAATAATATAAAAAGTAAAGTCGAGAAATGCACCAAT
AGACCAAAAGATAGTAGAAGCCCACAGCGAAGATCTATACGTAACTCAATATCGCCGGAC
GAAAAATTACGACGTAAAAAATCTGCGAGCTTATCACGGTCTCCTTCACCGCGTAAGAGA
AAGGAGATGAAAACAACAGAGTCTTCCAGTATGAAAAAGAGTGAAAGATTGTCAGAGAAG
AGACATACGTCCTCACCGAGGGAACGGAATAAGAGATCAAGAAATTATGAACGAGAAACT
CACGGGGACCGATCACAATCTGGATCACGGCGCAAAAGCAGAAGTACCTCCAGTCTCAGT
TATTCGCCTGCACGTCGCAGCCCTGAACGATATCGCGATATCATTGAGAAACTACCCGAG
AAGGATAAGCGTAAATATATAGTACCTCAATCCAGAAAGAAGAAGAAAGAGTCAATCGAG
GGTTACAAGCCTACGGTGGTTTGCATGAGGAGTTCGTCGAGCGAAAACGACGATTCGGAG
GAGGATTTCCTTCGGTTGGACGAGAGGGTGCGCCAAGATGAGCTCGACAACAGGGAATTT
AGCAGACTGAAGGAGAAACTAGCTCAGGTGGCGAAGGCGACAATGGAGCACAGGAGAGAC
GTGGAGACGAACGGACCTTCGACGTCGAATACCGCTGCGAAATACATACAAGAGAGTCTA
AAAAAACCGAACGTTAGTCCAGTTATCGACAGCAAAGTGAAGGAGAAATTGACTCAGGTG
GACGTTATCAAGAAGAGTCCAGAGAGGGCGGCAAGTTCGCAGAAGAGTCCACGGAAGATA
GAGAACAGTTTGGCGGGAACAAAGAAGGGAAAGGGGGCTGGAGCGCGGCACAGTTGGTCG
CGGTCCACGTCACGTTCGCGGGCGCGATCGATCTCACGCGCGAAGACTTCGCGCTCGGGA
TCCGGATCGCGATCGCAATCCCGATCGTCGCGATCCAGATCTCGATCTTATTCTTCATCA
AGGTCAAGCCGTTCGAGCTCGTACAGCAGCAGGTCCTCGTCAAGGTCTTCGCGCAGCACC
TCCAGGTCCACTCGTTCCTCGAGAAAAAAATCCCGAAAATATATCACGAGCTCCGAAGAC
ACGAGTAGTAGTTCCTCCAGCTAGTGATGCGACTGCTAGTGTGAAATAATTTAATTTATA
AGTTTATAATAATAGTAATATGTATCGTATTATTCTATGAATAAGGTTTATTTTCTTATA
ATATAATTGCTAAC
(3554 bp)

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