SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37727_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		peptidoglycan_recognition_protein_isoform_X2_[Bombyx_mori]
Ontology
GO:0002221 P pattern recognition receptor signaling pathway
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0006955 P immune response
GO:0008270 F zinc ion binding
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0016019 F peptidoglycan immune receptor activity
GO:0016045 P detection of bacterium
GO:0032689 P negative regulation of interferon-gamma production
GO:0032827 P negative regulation of natural killer cell differentiation involved in immune response
GO:0042742 P defense response to bacterium
GO:0042834 F peptidoglycan binding
GO:0044117 P biological process involved in interaction with host
GO:0045087 P innate immune response
GO:0050728 P negative regulation of inflammatory response
GO:0050830 P defense response to Gram-positive bacterium
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.73 TPM:1.68
ORF EntryO_SariASG14027_3prime_partial:A_SariASG_c37727_g1_i3
Sequence
(Nucleotide)
CGTACCAGTATAAATCGCAAATATTTAATCAGCATTACCTGTTCATTACCGCCAATAATG
ACAACTAAAAATATCATCAAACAAAAGTTAATTAAATACCAGCATAACACGCAGTAAGAG
GCGCGAAGATAGTCGCGTACGGGATCACGAAGCGAGCCGTCGTCCGAGTGGTTAATCACC
AGGCTGCGTCACGCCATTGTGTCTGTACACGGTTACTGAAAGTCGTCAGTGTCAAGAATG
TGGAGCGAAAGTGACGGCGAACGGGAACACGAGCTGAGCAGCCGGTCGAGCACCGGCTCC
GAAGTGGTGATGATGAACGAGAGAGCGGTCGCTTCCGCCCTCTGTACCGCAGTACCCACA
GTATCCAACCTCAACGTGACCAAGACTACCGGCCTTCACATCGGCCCAAAGTTCGTGTCC
GTCACTCAGAATGTGCACAACAACGAAGTGGTCAAAGGCCGTTTTCTGGGCCTGGAGCTG
GTGTCGTCAAAAAAGACACGCAAGTTTCGATGTAGCGTAGCGGTCTTCGTGTGTTGGGCA
CTTGTTGTTGCATCTGGATTATCGTTCTACATCTTCCATTTTGCCTTGCAACAAGATCGT
CTAGATATAGATTTACACGAGGAGTGGTACCTTCGACGTGGTGATTGGCAAGCAATGCCT
GCTTACAATGTGGAGTACCTGAGTTTACCGCTTTCCTACGTTCTCATCGGACACAGCGGC
TCAGATTATTGTGACCAGAAAGTGGACTGTATAAAAATAGTTTTGAGTATACAGGCTGAT
CATTTACGAAGAGGATGGGACGACATCGGACCCAATTTTCTTATAAGCGGGGAGGGATTG
GTCTTCGAAGGCAGAG
(856 bp)

- SilkBase 1999-2023 -