SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37689_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		Eukaryotic_translation_initiation_factor_6_[Operophtera_brumata]
Ontology
GO:0000054 P ribosomal subunit export from nucleus
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0003743 F translation initiation factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0009267 P cellular response to starvation
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0042273 P ribosomal large subunit biogenesis
GO:0043022 F ribosome binding
GO:0043023 F ribosomal large subunit binding
GO:1902626 P assembly of large subunit precursor of preribosome
Transcript
Level		FPKM:0.49 TPM:0.47
ORF EntryO_SariASG13961_complete:A_SariASG_c37689_g1_i3
Sequence
(Nucleotide)
GTAAAGGTTATGAAATTAATGTGTACGAACACTTGCAGCTGATGAGAACTTCTATAGTAA
CTATTATGTTTAAATTAACGTCATCAAATAGTGGATGTCGTAAAAGAGGACTAGAGGATA
AACTAGGTGAGGAGTAGCTGGGGGATGCACATCGTGCCCTGCGCCTCCCCATAAGGAGGT
TGAGAGGGGTCCAACTGTCCCCTGGAATAGTTGAAGGGGTCGGCTGAGTCGAGCGGTAGC
AATACAAATTACAATTCCCACTCTCCGGCTAAAGAGGGTGCACCAAACCTCCGCGGTTGG
TCAACGCAGCATAAGATCCTACGAGGACATTCCCCGCAATTGTTTGCCGGAACACTTCAA
CATTTAATGTGTCAGCAAGGATTTCTTCTGTGTCTTTATCTAAATCTGGATGAACTAGAG
CTACATAGTCGTTACATGCTATGACGTTACCCAAAGCGCTCAGGCGTTCCTCGACGCGCT
GCACTTTTACAGCGTCGGGCAAACTATTTCTAATATGTTGTAATTCTGTGTCTGTGGTTG
AAGATGGGACCAGGAGCCCGTTTTTATTCGCGACGGTCATTCGGCCGATAATCCGGCATC
CGCCGACGCTCGCATGTATTACGGGGATCGTGTCGGCCAGTTCCGCTTCAAACACGCTGT
AGAAATTTTCAGAACCTCCAATAGCGACAAGACAATATGAATTTGTCAATTTACTGAACA
CTCCAACTTCGTTATTATTTTCAAATTGAACGCGAACCGCCATGATTTAGTCTTATTTTT
TAACTTTAATACTTGGTATTTCACAATAAAATGAAAAGTATTTCACAATAATATAAAAGA
ATATATATCACGTGGGAACA
(860 bp)

- SilkBase 1999-2023 -