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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37687_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_retinal_degeneration_B_[Amyelois_transitella]
Ontology
GO:0005388 F P-type calcium transporter activity
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0007603 P phototransduction, visible light
GO:0007608 P sensory perception of smell
GO:0008525 F phosphatidylcholine transporter activity
GO:0008526 F phosphatidylinositol transfer activity
GO:0015914 P phospholipid transport
GO:0016021 C integral component of membrane
GO:0016029 C subrhabdomeral cisterna
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016059 P deactivation of rhodopsin mediated signaling
GO:0035091 F phosphatidylinositol binding
GO:0045494 P photoreceptor cell maintenance
GO:0046488 P phosphatidylinositol metabolic process
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0070588 P calcium ion transmembrane transport
GO:0071482 P cellular response to light stimulus
Transcript
Level		FPKM:0.70 TPM:0.68
ORF EntryO_SariASG13955_3prime_partial:A_SariASG_c37687_g1_i1
Sequence
(Nucleotide)
GTAAAATGTACAACAATTGTGTAGACAGTTTTATAAATTCATTTTGTATAATGTTTATAA
AGAAATTGTATGTTATAGATACATTAAAAATAATAATAATAAATTTTGTTTTTTTTTGTA
GGATATAATTTTCCACATTCAAGCATAAAAATTCAATCATGTTAATAAAAGAGTATCGGA
TACCTCTTCCACTCACAGTGGAGGAATATAGGATTGCACAACTATATATGATTGCAAAAA
AGAGTCGAGAGGAAAGTTCTGGTGAAGGCAGTGGTGTGGAAATATTAGTGAATGAACCTT
ATGAAAATGGTCCTGGAGGTAAAGGTCAGTATACTCAAAAAATTTATCATGTTGGTAGTC
ACTTACCAGGATGGTTTAAAAGCTTGCTACCGAAATCTGCCTTAACCGTTTCTGAAGAAG
CTTGGAATGCTTACCCTTATACTAAAACTCGATACACTTGCCCATTTGTTGAAAAGTTCT
CTTTAGAAATAGAAACATACTATTTTCCTGACAATGGACACCAGGAAAATGTGTTTAATC
TGACAGGAAGTGATTTAAAAAATAGAATAATTGATGTTATTGATGTTGTCAAAGATCAAC
TTTTTGGAACTGATTATGTAAAAGAAGAAGACCCTAAATTGTTTATTTCTCAAAAATGTA
ACAGAGGTCCTCTTTATGAAAATTGGTTAGAAGATTATTGGATGGAAGTACAGGGAAAAT
CTCAACCTCTAGCCAATGGAAAGTCTCTCATGTGTGCTTACAAACTTTGTAGAGTAGAAT
TTAGATACTGGGGTATGCAAACAAAATTGGAAAAGTTTATTCATGATGTTGCATTAAGAA
AAACTATGCTTAGAGCCCATCGCCAAGCATGGGCTTGGCAAGATGAATGGTATGGGTTGA
CAATGGATGATATAAGAGAGATAGAAAAGCAAACACAATTGGCCTTGCAGAAAAAAATGG
GAGGTGAAACTGGTGATGATCAAGATATATCTGAAGAAAATTCCAAATCACTTGCAGCTA
CAATGAGTAGTTTAGAGAAAAACGAAGAAACAAATACACCTTTAATTACTAAAAAAAGTA
TCCAGAAAAATTTGACACCTGAAGGTACTCCTCCATCTGAACTTAAAATTGCATCTAAAT
CTAATCTTCTATCATCATCCTCCGGATCTATTAAAAACTTGCAAACTCAGGCTGCTAATT
GGCGAATGGAAACACTTGTCAGAGAATCGGAAACAGAGACAGGCTCTGAAGATGAATTTT
ATGATTGTGAGTCTTCTTTCAACAAATGGTCATCTATGTGCTCCCTGGATGAAGCTGATA
TCGATATTTCTCCTTCTCAAGGTGATCAAGGTCAAGAAGATAGCATTTTTAACCCTTCTT
TCTTAAAGCGAGTAACTTCTGAACGGG
(1407 bp)

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