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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37635_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		RNA_polymerase-associated_protein_Rtf1_isoform_X2_[Helicoverpa_armigera]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007219 P Notch signaling pathway
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
Transcript
Level		FPKM:31.71 TPM:30.70
ORF EntryO_SariASG13874_complete:A_SariASG_c37635_g1_i1
Sequence
(Nucleotide)
CTTTGGTTGATTGTCGACTTCGAGAATCGAGAAGGAAAAAAGCTAACGTATTTTTGCATC
ATTTCTACTTTAGAATATTTCCAAAATGGCTAAAAGAAAGAATAAACCGTTGATTGATTC
CGACTCTAGCAGTGAGTGCTCAGATTTAGATTCACAATTCCTGAACTTGGCAAAGAAAAA
GAAAAAAGGTGATTCACCTCCTCCTAACAAATCAAAAGGTAGATCTGATAGATCATCAGG
AAGTGAATCGGACTGGGATGATGATGATAAGAAGAACTCCAAATCGTCATCGTCGTCAGA
TTCTGGTTCAGAAAGTGACGCGAGAAGCGATACATCGAAGAAGAAAGAAGAGCCTCGGAA
CACTAGAAAGACTTCATCAGACCACTCTGATGATAATAGGAAAAGGCCGGAACCTAGAAA
AAGTACAGAAAGTGTCGCATCGGAGAAAAAAAGAGACGTTTACAGTGAACCTGAAGAAGG
TGAAGTCTCGTCACATTCATCGGATAATGATTCGATCGATTCCGCAGAGGAATTCGACGA
TGGGTACGATGAGAATCTTATGGGGGACGAGGAAGACAGAGCTCGGCTTGCGGCTTTGTC
CGAGAAAGAGAGAGAACAGGAAATATTCAAACGTATTGAGAGGAGAGATCTCATGAAAAC
AAGGTGGGAGATTGAACGTAAACTCCGTCTGGCTCGTCGGTCGGCGGCGGAGAGATCAGC
CTCGCCGGGGGAGGTCGCCAGGAGGCGAGAGGCCCGGAGGAGGAGGAGAGCCCTGCGCCT
GCAGCGGCAGAGGGAGCGGCAGGCGAGACCCCCCACTCCTCAACGGGAGAGGGAGGTTCC
TAAACAGGCGGAACCCCTCGTAGAGGAATCAAAGGAACCTGAGGAGGAGAAAGAATTACC
GGCTCCCAGTCCAGGGGAAATATTGGATGACCCCAAAGATGCAGAAGAATCGGAGCGGTC
CGCGTCACCGTTGTTTGGGGCTAAGACCGAAAGGAAGAGGAACGTCGATGACAGGAGGCA
GAACGCAATGGCGGCGCTGAGGGCGCAGCGCGACGCGAAGGCGACCAGGGTGGAGCACTT
CAAACAGAAGAAACGTCTCGAAGAAGAGAAGAACAAGGACAAAGACGACGAAGACGACGC
CGACGCTGAAATAATCGGCGGCACAAGCAAACAGAGCGTTAAGCTAAAAGCCTCGGACAT
TTATTCCGACGATTCCGGTTCAGAATCGGAAGACAACAAATCGGGTCGTCGAAGTCCGTC
AAATTGCTCGTCATCATTCGCCGAGGAAGAAGAGAAGAAGAGAGAGGAAGTAGAGATCAA
ATACGCCGATACGAAAGAACAAATCAACAAACTTAGATTAAGCAGGTTTAAGTTAGAGAG
GCTCGTGCATTTGCCGTTTTTCGCGCGCGTAGTCACAGGGTGCTTCGTTCGCATCGGAAT
CGGGAATAATAACGGGAATCCCGTATACAGGGTGGCGGAAATAGTAGACGTATACGAAAC
GGCCAAAGTGTACAACTTGGGCAATACGAGGACAAACAAGGGTTTCAAGTTGAGACACGG
CACACAGGACAGGGTATTCCGATTGGAATTCGTCAGTAATCAGGAATTCTCGGATACCGA
ATTCCAGAAGTGGTACAAAGCTATAAAGGACGCCAATAAGAAGCCGCCGACTATGGAGTT
CGTCAGGAGCAAGATCAGCGAGGTCAAGGACGCGCTCATGTACGAGTTCAAGGAGGAAGA
CGTCGAGAAGATCGTAGCGGAGAAGGATAGGTTCAGATCGCATCCGACGAACTATGCGAT
GAAGAAGACACAACTAATGAAGGAAAGAGACGTCGCACAGTTGCGAGGCGACGAGGAACT
AGTGATGGATCTGAACTCGAAGATCCAGGAGTTGGAAGACAGGGCGAACCAGCTGGACAA
GACCAGGACATCATCGATACAGAGCATATCGTATATTAACAACAGGAATAGAAAATTGAA
CGTGGAAACAGCGGAGAAAGCCATCATGGAGGAGGTGAAAGCGAATAAAGGCAAGAAAAC
CGATGACCCATTCACAAGAAGACACACGAAGCCGGTGATGAACTTCAAGTCGCATCAGGG
CAACAGGAGTCAGGAGATGATGAGGAGTGAAGTTGAAGCCGTAGAAGTTCAGATGCAAAA
AGTGGAGGAACAGAAAGCAGTAATGCGGGACCGGCAAGAGAGGGAACGATTAGTTCACCA
TCAAGACGTGGAGAAGATGAGGAAAGATAAACCTTCCTCGACTGACAACGCGAGTCTTTA
CTCGCTTCACGATTTTGACATAAACATTGAACTAGATTTACCCGTTGCGAAAGCGATAAA
CTCCCAGCCGAAGCAGACGACGACGAAGGTGAAGGAAACGGGGCCGAAACGGTCGCTGAA
TCTCGAGGAATACAAGAAACGACACGGGCTCATATGAGTGTCGTTTTGGACAGTATTATT
ATGTTCCTGATGTGTGCTCGCGTGCGGGGACTTAACGTGATTGTAGGCGCGGGGGCCGAA
TATTCGGTTTTACGTGAGGCCGAAAATTCGGTTTCACGTGAGGCCGAAAATTCGCGACCA
CGTGTGAAAGAAGGTTCGTTATCGCGTGCAACCGAAGCTTCGATATTAGGCGAGCCCGAT
GATTTGGTAATGCGAGGACGAAAATGCATATTATGCAAAATGTTGGTTTACATGCGCTTC
TGAGGGTTCGATATCACGCGTTGTCGAAGGTCCGGATTCGGTCGCTGTAAATATACTGTG
ATGCCGATATTCGGCTGCGACGCTTATTCAGCTTTGCTGATTTTCGGTTTTAATGTACAC
CGTCGACGGTTCCCGATGCGGACAACAAGTCGACAAGACTTATATATAATTTATCATTTA
ATTTTCCGACAATTTTTTATTTCTTAATTCCCGA
(2914 bp)

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