SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37594_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		RNA-binding_protein_5-A-like_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.05 TPM:4.89
ORF EntryO_SariASG13810_complete:A_SariASG_c37594_g1_i4
Sequence
(Nucleotide)
GATGGCTGCTTTTTGTATCTACTATCTTGATGTGAATGTCGCATTACCTAAATTAGTATA
GTTTTCTCTTAACGCTTATAACGTGATAAAATAAGATTTAAAACGTGTTCAGTAAACATT
GAAGGATAACGTATACCACAAGTGATTGCTACAGCAGGTAAAAAGGGAAAAGGAAGGTTA
TATAGAAAGATAATATTTGGGTATTCGCAATCATCATGGGTCGACAACAGGAAATGTGTA
AGTGCAAGAATTTTATTGTTACGGATGATGTTCACAGGCTACGATGTCGTGGCGTGGGCG
TGAAGAGCGCGGAACGAGGTGGGAGTCCGACGCGAGATGGGAAAGTCGAGGTCGATCACC
TGTGTGGGAGTTACGACGCAGCTTAAGTCCGAACCGGCGGTCGCCACCACGCGAGCGCCA
ACGTTACGATAAGGATGACCGTCGCGATCGGCACGAGCGTGATTACCGCCGCGACCGAGA
CAGGCGCGACCGCGACAGAAAACGTTCGCCCAAACGTCATGAGGACGCGTACGTTCCAAC
TCCACCATCACCGCCCCGTATCAGCGGTGAGTCTGATAGGAAGACTTCTCGATCAAGCAG
CCGTTCAAATAGTCATGAAAAAGACAAACACGATACTGATTATGACAAAGAAAAACACTC
TCATGATGAGCAACACCCAATAAACGCGTCTCCGGGAGATTGGGTTTGTAAATGTGGCCT
GAATAATTTTAAAAGGCGCCAAGTATGCTATAGAAGGGCTTGCAATGGTAAAAAATCAGA
AGGTATCATCTTCAACGGTGATCCAGATAGAATCAGTGAGAAATCAGGAATAACTAAACG
TCTCCTGTTCCGGCGACTAGATGCTTTGACAACTGAAGAAAGGATTCTTGAAGTTATAAA
GGATAAATGTTCAAAAACTGTACTTGATTCCATTATCGGAATCACTATTGGCAGAGAGGC
ATTGACAGGAGCTTCTAAATGTTTAGCATTTATTAATTTCAATTCAATAGCTGACTCAAC
TGCTGCATATACTGAGATGACCAATTTGCAGCCTCCATTGGAAATTGATGAACGAGAAGT
ATTAATTACTTTTTACAATGAACCTAAGAAATTTGTAAAACCAAATAACCTTGATTATGC
TGGCTATTATTCACAAGCTTCTACTTGTGGAAATGTGACAGCTACACAGGCATTATCAGA
AGCAGATAGGGTGAATGCAGCTGCGGCTGTAGCCCAGTCTGCTATCAGTGCTGCTCAAGC
AAGGAATTTGTCATGGACTCCAAACTCGACTCCAACTTTTGGTGCAACATCAGCTCAAGT
AACTGCACCAATGAAGGTACCAACAGGTGACGGAAGAACAGTCTATACTGCACCAGATGT
GAGAACTTTTATGTATGATGAGACTTCTGGTTACTACTATGACCCATCTACTGGTTTATA
TTATGATGGAAGTACCCAGTACTTCTATAATAGCCAAGTAAACCAATATATGTATTGGGA
TGGAATGTCTTCCACATATGTTGCTGCTGGGCAACCGCAGCCAGGTGGTGAACAGATGAA
TGCACAGAATCCCTCTCAGGCTTCTGATATAACACACAAAGAGCCAGAAGAGAAAAAGAA
AAGGGATAAAGAAGATAAAGTGAAAGTTGCAAAGAAGATTGCTAAGGATATGGAAAGATG
GGCTCGGACATTAAACCAGAAGAAGGAGAATGCCAGAAGTAACATTGTGATGGAACAACC
TCTGGACACGAGTGCCAGTAAAGGATCAGCTGATATAGGTTTCTCAGTTTTAGGAGCAGG
ACCATCTGTCACTCATGTGAGGGAGTTGTCACCACCTCCATCTGCTGAAGAGTTTCTAGT
GAAAAAAGTTAATGAAGCAGTAGAGGATAACGATGAAGGGATCATTGACTGGTCTAAATT
AACTTGCCTTTTATGTAAACGCAAATTCCCCTCCGCGGAAATACTCACAAAGCATAAGAC
AATGTCAGATTTGCACAAACAGAACTTGGAAGAGTTTAGAAAGAAAAATGACTTATTACC
TCAGTTAAACGGTTATAGGGACCGAGCTGCGGAAAGAAGGTTAAAGTTTGGTGAAGATGA
TACTCCCATTGTTAGAAAGCACTATGATTCCCAAACGATGGGGCCACCTGTTCCTTCTCA
TCCACCTCCGTCTGTAGTCGATACTATTGGTGGCAAAATGCTTCAGAAAATGGGATGGTC
AGAGGGTAAGGGTTTGGGTAAAACTGAACAGGGTAGGACAGCCCCTATAGAAGCCCATCA
GAGACCGGGGTTGGCTGGTCTCGGCCAGAAACGGGGCATCTACACACCAACGCCGGGCGA
AACGTATAGAGATACTGTCAAGAAGCTGATGATAGCTAGATACAAAGAGGTTGTCGGGCA
GGAAGATGGAAATTAGATGACGGCGCGAACCTCTGACAGTACCTCTGATGAACAGCACTC
AGAGATATTCCGAAACGTATGTGGTGAGTATGATATATAAACTGATATAGCCATTATATA
CATTATACATTTTGAAAATTCTACCTTCCTACAGGGTGTTACAAATCGTAAGTATATTCT
GAGAACCGATCTCAGGTGAAAACTTTGTGAGTTTGTCCTATGGTATTGTGTTTTTCTCTT
ACAGCTTTGTGATGCAATTGAAATACCTAATTATAAGAATTGTTATTTAAGCATAGATAA
TTTTAAGTCAGTAAATACCTATCAGAAAAAAGTTGCTCAAAGCGTGTTTATGTATTTTGC
AGTATAGAATAACATTTTGATTTAAGTATTATATATATCTATCCAATAGTTATAAGATAC
AGATAAAATATAGAGTGAGCTTTTAGCATTTTAAGTGTATACCTAAAATTGTAATAAATA
AACTTAAGATTATCATGCTTAATATTAGCAAGAATAATTAAAGTAGGTACTCGATATACC
GAGAGAGAAGAAACAAACAGCGGGACCGCGAAAGGGAAACAAACAGACTGGAAAAGAAAA
TGGAACATATGTGATAAAACTGTGATATACTTTAGTGATGTGATGTTATTATGAAGAAAA
GGTGAATGCTTGTGAAATGACGAAGTTTTACTGATAAATGTGATCATTTACATTACAGAG
TCTACGCGCGATGCCGGACCCACGTGCCAAACAAAAAATGTCTTACAAAATACATTTTGT
ACATTGTACCTCCTAGATAAAATAATAAATATATATTGTAAATAGTGTTTTGTACGCATG
GCCCCTCTAAAGATAGTTTTTTTTTGCACATGATACCAGTGACTAGAAATTTAAATGGAG
TTTTCTTATGTAAGAAAAAATACTACAGAATATTAAAAACAATGTTTAGTATCCATAAGT
CTTAGGCGAT
(3370 bp)

- SilkBase 1999-2023 -