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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37520_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		double-strand-break_repair_protein_rad21_homolog_[Bombyx_mori]
Ontology
GO:0000228 C nuclear chromosome
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0008278 C cohesin complex
GO:0016020 C membrane
GO:0034991 C nuclear meiotic cohesin complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
GO:0071168 P protein localization to chromatin
Transcript
Level		FPKM:19.47 TPM:18.86
ORF EntryO_SariASG13671_complete:A_SariASG_c37520_g1_i3
Sequence
(Nucleotide)
TCTTGAAAGCGAATTGTTGTCACTTGTCATGTTTACGTTGTATGTGAATTGTGAAAGGCG
AAATTTTTTATTTCTTAGTGAAATTGAATTTTATTCAGGACATAGTTAATGTGACTGTTG
GTTGGGGATAGCAAAAAACATGTTTTACGCACATTTCGTGCTGGCCAAGAAGGGCCCTCT
AGCCAAAATTTGGTTAGCGGCTCATTGGGATAAAAAACTAACAAAGGCACATGTATTTGA
GACAAATATTGAGAAATCTGTCGATGGAATATTGAAGCCTAAAGTGAAGATGGCTTTACG
TACATCTGGCCATCTGTTACTAGGAGTTGTAAGAATTTACTCCAGAAAAGCTAAATACTT
ACTACAAGATTGCAATGAAGCATTTGTAAAGATAAAGATGGCATTCAGGCCAGGCATGGT
GGACTTACCTGAAGAACATCGGGAGGCTGCCATGAATGCCATAACATTGCCTGAGGTTTT
TCATGATTTCGATACTGCAATGCCTGAGCTAAATGAGGTTGACATTGAAGCCCAGTTCTC
TCTCAATCAGTCTAGGGCTGAAGAAATTACAATGCGTGAAGACTATGGTTCATTAAATTT
GGTGACACATGATGATGGATTTGGAGATATGGGTTTTGATACAGATAATCCTGATATTAT
GAGAGAGGCAATTGGTACTGATGGTGGATTAGAGCAGAGTAATCTCCTATTTGCTGATGG
TTCTTCACTAGAATTGGGCGGTAAAGACAATGGTGTGGCCAGTACAAGTGCGGCTGGTGT
GCCTACCCTGGCAACACCAGCTCATGAACGTCGTATGGAGGCAGCACCTCATGGGCCCAT
GGATGATGGTTTTGGTGGAACTATTGGTGATGTTGGAGATTTTGGACATGCGGGTGGACT
TTTTGAGGGCGATTTGTTTGGCGAAGTGCCTTCTGGTGGTGCTGCTCCCACTCCTGGAAC
AACAGCCCAACCGCGTTCTCTACAGGCAGAGATCGAAGCGAGCGGCGCAGGCGTCGGTCC
CTCTGGTGTGGAAGGTGACGCCGACCGGGAGCACGGCACTGCCGGTGCGGATACCGCGGA
TAGTGATGATGACATGGGTGATCATTACGACGCGGGACACTCACCACAGCATAGTTGGGG
TGGTTCACCTCCGCACGAAGAGCCACGTCCTATGGACGAGGCGCCAGACTTGATGCCACC
ACCCGCTGCACCAATTTCACCTGTTAGGCCTATGGAGATAGACGAGGATGCGACAGAGAC
AGCACGAGTGGCGACTCCAGCACCGGAACCTGAAATGGCGGCGGCCGACAACACTACACT
CCTTCAAAACGACGAGGAGTCATTCGCTCTGGCCCCTGTCGATGCAACAGTTCTCAAAGG
TATAACGAAGACGAAGCGCAAACGTAAGTTGATCGTCGACGAAGTGAAGAATATATCTGG
TGAGGAGATGAAGAATCAGTTGAGTAACACTTCGGATATCGTGACGACGCTGGACCTCGC
GCCGCCGACGAGACGGCTCATGCACTGGAAGGAGACGGGGGGAGTCGAGAAACTCTTCAC
CCTCCCAGCCAGGCCGATACCCTCAAGAGTTCTCTTCAAGAAATACCAGCGTAACATGAC
ATTGAGAAGTGAAGCGGAGGAAGCTGAGGCACGGTCACCGGAGCCCGAGCCTAGTGTTGC
CAGACGTGGAGGCCGTAAGCGACGACACGAAGAGAGTTTCCAATCTCCCGAGACACCAGC
GCCCGCGTCCGTGGCGCCTCCGGTGCCCGAAGTGGAACCTCACACACCCCTCCCACACGA
GTATGAACCGTCGGCTGACAACGAGATCGGTGATTACCCACATTCGGCTAGATCACCCCG
TGCAGCCCTAGACGTCGATGCACCCCCCACACCTGGTATACTGAGTACACTGGGTGCTCC
GCTGACACCAGGCGGGTTGGGCCCGCTGACACCTGGCACGCTATTGCAGGCGGGCCTTAC
ACCCGGCGATCTGCATCACGGTGTCCTGACACCTGGTGGTCTTCAACACGGCGGCATGAC
CCCAGCTGGACTACAACACGGGGACGGTCCAGGCGTGGACCTGGGCTTACCATCAAGCGG
TATGACACCAGCTGGATTGCACCACGGTGGCATGACTCCGAATTTAGGGCTGGATGGTGG
TATGACGCCAGCTGGGTTGGTGCACGGTGGTCTCACTCCAGCTGGTCTTCATCACGGTGG
AATGACACCAGGCGGCTTAGACCATGGCGGTATGACGCCGGCTGGTCTGGCGCACGGTGG
CATGACGCCAGGCGGTTTGCAGCACGGCGGCATGACGCCGGTTGGGCTCCAACACGGAGG
TATGACTCCATCCGGTTTACAGCATGGCGGGATGACACCGTCGGGTGCGGGACAGAGCGG
TCTAATGGCGCACTCGACGGGTATGGAGACGTTGCCGATGATGCCGCAGCTTGCCGGTGA
ACAGGTCTCCGCTATACTGGCGCGTGCGACCGATCCCATGCTGCACGGCCTCGACGATCA
ACATGATTATCAGACCGGTATGCATATGACGAATTTGGGTTACGATGATCACCAGCCCGG
CCATCAGAGTCCTCACCATGATTATGATTTACCACCGACACCGGAACACGCGGAGGAGAC
CGAACGCGAAGCGGGCGAAACCGACGAACAGTTCGAGGAGCGCGTCCTGAACCGAAGAGC
CGCACAGCTGTTCGCGGTCATGAGACCGAAGCTCGCCGTCGGCTTGTCACTATCGTTTTG
CGATCTGGCCCCGAGGCACAACAACAGGAAGCAGGTCGCTCAGAAGTTCTACAGTTTACT
CGTGTTGAAGAAACACCAAGTGTTGAAGTTAGAACAGAGCGAAACATATGGACCTATTAA
TATTACAAAGGGGGCTCAGTTTGAAACGGAGTCAATTTAAGCACTCTATTCTAAATAAAT
TACGTTATTTATATTATAATAGTATTTAAAATGTAAAGAAGAATATCATGAGGAATTATT
AAAAAAAAAAAGAAAAAAAAAAAAGAAAAACAGATGATATAATTAAAGATGTTGATGCGG
CGGTGATTGATGTTTAGTTTGTAAAGTTTATATAGAGTTCAAGGGGATGTATGTTGAACC
AAAAATTCTTCTTTATTATTTTTATTTTTTTTGTATAAAATGATAGTTAATCCGAGTCCC
ATAAAGATAACATTGATATATATAATTAAACACTTTTGGACCAAATTATATCACAAATAT
TAATACAAATGAGGCAGATTTAAAATTGTAAAAATGAATAGTTTTATCTTTGTAAAGAGG
ACTCGGATTAAACGAGATGAATGATGTCCGTTTGATTATTGTTCTGTATCCGGAGTAAAG
TAAAGAATGCCTTATTTTTTTTTCGCTGTAGCCTACAAGTGAAATTAGTGTAGTTTATCT
GATAATAGTTAGAAATTATGTGTTATTTGTTTGATATATAAAATAAGAAAATAAAATGGC
GTTTTTGAATAATTTTGTCTCTTCTACAGTGGGCGGGCGGATCAGTATAGGCGTATACTA
ATGTTATATTTTTTAAGTTCCAATAAATGATTGGTATTATGTCTCGTTGAAATCATGAAT
AACCGCATGTAGAATAGGCAAACTTACTTGAAGTTGAATATATTTATGTAGAACTAGCTG
TGCCCGCGGCTACGCTCGCGTAGAATTTAGACAATTATATTGTAGTCGATAGCCGTCAAT
TTTTTGTTCTCGAATAAGACAAACGCATTTACTTACCGACTCTTCCTTCGTGCTCAAGTC
GCCGCTTGTCATTAAAATTACCATAACTTTTGATAGAGTAGACCGATTTTAATGAAATAA
AGTTTTGATGCTACTCCGGAATATGCTTTATAATGCACTTTATGAATTATTAAAATTTAG
TTGATACTTTCTAATTGATGCCGGCACAACTAAACAGACAGACATTTCTTAAAACGATAT
TTCAGAAATTTAATTACAGTTGATTGAAACTATCTGCGAACGGTCTCACAATACTGAACT
TAGAAAATAGGAATAAAAAATTCAACAGTCTTTACCATTATTAAAGACGGATTTCATTAG
ATTCTTCTCGAAGCACATATAGTACTTTAACTCTCAAAATACATATTGCCTGATAGTTTT
TATTATCTCAATAATACGTTTTAAAAATATATATATATTAAACAAGACTTTGTACCAATC
ATTAAAATAATTTACTCGAAATAGATAAAAAATTGAGTTATGTTTCTAGTAATTTTGTGA
CCCACTGCATATTATGTAACATTGTTTGATGTAATTTGAAGCTTTGTGCCTATAATAGAA
ATTTATGTTAAACTTAACTATACTGTATCTATCAAATATATATATATTATTATTGTAAAA
CATTACAATTTATATTAACAATGAACGTTTTGAGGTATTCCAGTATTGATTAAATTATGG
TTATGGAAAATATTCTCTATTGAAAAATTGTGCTGAGAGTTTTGTAAAGAAAATGTTAAT
TCTAAGAACACGAAATAAATTACTATACAATAATAGTACAAATATGAGAGATAAGTGTGT
ATCGTTTTTGCTTTTCTTTAGATTCGTTTCACAAATGAGAATATGTGGCGCTTTTTTTTT
TTTGTAACAGACTCGATTTAATTATAGATATATCCTAAATTCAGAATGTTATTGAATATG
TTTTAGTTAATACTAGAAATTCCTCGAAAATTTTAAGTGTTTACCTCCGCAGTTTCGGC
(4739 bp)

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