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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37520_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_double-strand-break_repair_protein_rad21_homolog_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000228 C nuclear chromosome
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0008278 C cohesin complex
GO:0016020 C membrane
GO:0034991 C nuclear meiotic cohesin complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
GO:0071168 P protein localization to chromatin
Transcript
Level		FPKM:20.02 TPM:19.39
ORF EntryO_SariASG13668_complete:A_SariASG_c37520_g1_i2
Sequence
(Nucleotide)
TCTTGAAAGCGAATTGTTGTCACTTGTCATGTTTACGTTGTATGTGAATTGTGAAAGGCG
AAATTTTTTATTTCTTAGTGAAATTGAATTTTATTCAGGACATAGTTAATGTGACTGTTG
GTTGGGGATAGCAAAAAACATGTTTTACGCACATTTCGTGCTGGCCAAGAAGGGCCCTCT
AGCCAAAATTTGGTTAGCGGCTCATTGGGATAAAAAACTAACAAAGGCACATGTATTTGA
GACAAATATTGAGAAATCTGTCGATGGAATATTGAAGCCTAAAGTGAAGATGGCTTTACG
TACATCTGGCCATCTGTTACTAGGAGTTGTAAGAATTTACTCCAGAAAAGCTAAATACTT
ACTACAAGATTGCAATGAAGCATTTGTAAAGATAAAGATGGCATTCAGGCCAGGCATGGT
GGACTTACCTGAAGAACATCGGGAGGCTGCCATGAATGCCATAACATTGCCTGAGGTTTT
TCATGATTTCGATACTGCAATGCCTGAGCTAAATGAGGTTGACATTGAAGCCCAGTTCTC
TCTCAATCAGTCTAGGGCTGAAGAAATTACAATGCGTGAAGACTATGGTTCATTAAATTT
GGTGACACATGATGATGGATTTGGAGATATGGGTTTTGATACAGATAATCCTGATATTAT
GAGAGAGGCAATTGGTACTGATGGTGGATTAGAGCAGAGTAATCTCCTATTTGCTGATGG
TTCTTCACTAGAATTGGGCGGTAAAGACAATGGTGTGGCCAGTACAAGTGCGGCTGGTGT
GCCTACCCTGGCAACACCAGCTCATGAACGTCGTATGGAGGCAGCACCTCATGGGCCCAT
GGATGATGGTTTTGGTGGAACTATTGGTGATGTTGGAGATTTTGGACATGCGGGTGGACT
TTTTGAGGGCGATTTGTTTGGCGAAGTGCCTTCTGGTGGTGCTGCTCCCACTCCTGGAAC
AACAGCCCAACCGCGTTCTCTACAGGCAGAGATCGAAGCGAGCGGCGCAGGCGTCGGTCC
CTCTGGTGTGGAAGGTGACGCCGACCGGGAGCACGGCACTGCCGGTGCGGATACCGCGGA
TAGTGATGATGACATGGGTGATCATTACGACGCGGGACACTCACCACAGCATAGTTGGGG
TGGTTCACCTCCGCACGAAGAGCCACGTCCTATGGACGAGGCGCCAGACTTGATGCCACC
ACCCGCTGCACCAATTTCACCTGTTAGGCCTATGGAGATAGACGAGGATGCGACAGAGAC
AGCACGAGTGGCGACTCCAGCACCGGAACCTGAAATGGCGGCGGCCGACAACACTACACT
CCTTCAAAACGACGAGGAGTCATTCGCTCTGGCCCCTGTCGATGCAACAGTTCTCAAAGG
TATAACGAAGACGAAGCGCAAACGTAAGTTGATCGTCGACGAAGTGAAGAATATATCTGG
TGAGGAGATGAAGAATCAGTTGAGTAACACTTCGGATATCGTGACGACGCTGGACCTCGC
GCCGCCGACGAGACGGCTCATGCACTGGAAGGAGACGGGGGGAGTCGAGAAACTCTTCAC
CCTCCCAGCCAGGCCGATACCCTCAAGAGTTCTCTTCAAGAAATACCAGCGTAACATGAC
ATTGAGAAGTGAAGCGGAGGAAGCTGAGGCACGGTCACCGGAGCCCGAGCCTAGTGTTGC
CAGACGTGGAGGCCGTAAGCGACGACACGAAGAGAGTTTCCAATCTCCCGAGACACCAGC
GCCCGCGTCCGTGGCGCCTCCGGTGCCCGAAGTGGAACCTCACACACCCCTCCCACACGA
GTATGAACCGTCGGCTGGTATACTGAGTACACTGGGTGCTCCGCTGACACCAGGCGGGTT
GGGCCCGCTGACACCTGGCACGCTATTGCAGGCGGGCCTTACACCCGGCGATCTGCATCA
CGGTGTCCTGACACCTGGTGGTCTTCAACACGGCGGCATGACCCCAGCTGGACTACAACA
CGGGGACGGTCCAGGCGTGGACCTGGGCTTACCATCAAGCGGTATGACACCAGCTGGATT
GCACCACGGTGGCATGACTCCGAATTTAGGGCTGGATGGTGGTATGACGCCAGCTGGGTT
GGTGCACGGTGGTCTCACTCCAGCTGGTCTTCATCACGGTGGAATGACACCAGGCGGCTT
AGACCATGGCGGTATGACGCCGGCTGGTCTGGCGCACGGTGGCATGACGCCAGGCGGTTT
GCAGCACGGCGGCATGACGCCGGTTGGGCTCCAACACGGAGGTATGACTCCATCCGGTTT
ACAGCATGGCGGGATGACACCGTCGGGTGCGGGACAGAGCGGTCTAATGGCGCACTCGAC
GGGTATGGAGACGTTGCCGATGATGCCGCAGCTTGCCGGTGAACAGGTCTCCGCTATACT
GGCGCGTGCGACCGATCCCATGCTGCACGGCCTCGACGATCAACATGATTATCAGACCGG
TATGCATATGACGAATTTGGGTTACGATGATCACCAGCCCGGCCATCAGAGTCCTCACCA
TGATTATGATTTACCACCGACACCGGAACACGCGGAGGAGACCGAACGCGAAGCGGGCGA
AACCGACGAACAGTTCGAGGAGCGCGTCCTGAACCGAAGAGCCGCACAGCTGTTCGCGGT
CATGAGACCGAAGCTCGCCGTCGGCTTGTCACTATCGTTTTGCGATCTGGCCCCGAGGCA
CAACAACAGGAAGCAGGTCGCTCAGAAGTTCTACAGTTTACTCGTGTTGAAGAAACACCA
AGTGTTGAAGTTAGAACAGAGCGAAACATATGGACCTATTAATATTACAAAGGGGGCTCA
GTTTGAAACGGAGTCAATTTAAGCACTCTATTCTAAATAAATTACGTTATTTATATTATA
ATAGTATTTAAAATGTAAAGAAGAATATCATGAGGAATTATTAAAAAAAAAAAGAAAAAA
AAAAAAGAAAAACAGATGATATAATTAAAGATGTTGATGCGGCGGTGATTGATGTTTAGT
TTGTAAAGTTTATATAGAGTTCAAGGGGATGTATGTTGAACCAAAAATTCTTCTTTATTA
TTTTTATTTTTTTTGTATAAAATGATAGTTAATCCGAGTCCCATAAAGATAACATTGATA
TATATAATTAAACACTTTTGGACCAAATTATATCACAAATATTAATACAAATGAGGCAGA
TTTAAAATTGTAAAAATGAATAGTTTTATCTTTGTAAAGAGGACTCGGATTAAACGAGAT
GAATGATGTCCGTTTGATTATTGTTCTGTATCCGGAGTAAAGTAAAGAATGCCTTATTTT
TTTTTCGCTGTAGCCTACAAGTGAAATTAGTGTAGTTTATCTGATAATAGTTAGAAATTA
TGTGTTATTTGTTTGATATATAAAATAAGAAAATAAAATGGCGTTTTTGAATAATTTTGT
CTCTTCTACAGTGGGCGGGCGGATCAGTATAGGCGTATACTAATGTTATATTTTTTAAGT
TCCAATAAATGATTGGTATTATGTCTCGTTGAAATCATGAATAACCGCATGTAGAATAGG
CAAACTTACTTGAAGTTGAATATATTTATGTAGAACTAGCTGTGCCCGCGGCTACGCTCG
CGTAGAATTTAGACAATTATATTGTAGTCGATAGCCGTCAATTTTTTGTTCTCGAATAAG
ACAAACGCATTTACTTACCGACTCTTCCTTCGTGCTCAAGTCGCCGCTTGTCATTAAAAT
TACCATAACTTTTGATAGAGTAGACCGATTTTAATGAAATAAAGTTTTGATGCTACTCCG
GAATATGCTTTATAATGCACTTTATGAATTATTAAAATTTAGTTGATACTTTCTAATTGA
TGCCGGCACAACTAAACAGACAGACATTTCTTAAAACGATATTTCAGAAATTTAATTACA
GTTGATTGAAACTATCTGCGAACGGTCTCACAATACTGAACTTAGAAAATAGGAATAAAA
AATTCAACAGTCTTTACCATTATTAAAGACGGATTTCATTAGATTCTTCTCGAAGCACAT
ATAGTACTTTAACTCTCAAAATACATATTGCCTGATAGTTTTTATTATCTCAATAATACG
TTTTAAAAATATATATATATTAAACAAGACTTTGTACCAATCATTAAAATAATTTACTCG
AAATAGATAAAAAATTGAGTTATGTTTCTAGTAATTTTGTGACCCACTGCATATTATGTA
ACATTGTTTGATGTAATTTGAAGCTTTGTGCCTATAATAGAAATTTATGTTAAACTTAAC
TATACTGTATCTATCAAATATATATATATTATTATTGTAAAACATTACAATTTATATTAA
CAATGAACGTTTTGAGGTATTCCAGTATTGATTAAATTATGGTTATGGAAAATATTCTCT
ATTGAAAAATTGTGCTGAGAGTTTTGTAAAGAAAATGTTAATTCTAAGAACACGAAATAA
ATTACTATACAATAATAGTACAAATATGAGAGATAAGTGTGTATCGTTTTTGCTTTTCTT
TAGATTCGTTTCACAAATGAGAATATGTGGCGCTTTTTTTTTTTTGTAACAGACTCGATT
TAATTATAGATATATCCTAAATTCAGAATGTTATTGAATATGTTTTAGTTAATACTAGAA
ATTCCTCGAAAATTTTAAGTGTTTACCTCCGCAGTTTCGGC
(4661 bp)

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