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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37484_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-processing_factor_39_isoform_X2_[Papilio_polytes]
Ontology
GO:0000243 C commitment complex
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:2.07 TPM:2.00
ORF EntryO_SariASG13605_complete:A_SariASG_c37484_g1_i3
Sequence
(Nucleotide)
CTGAAGAATATTGAATATAGATGTTTTGAAATTAAAAATATTTCCGTATTTTTCAATAAT
TTCCAAAAATAAATTCGTTTTTCAATATGTCGATACTTGGTGGCTTCCCTAGTACGAATA
TTATTATTCTGTGTTTGTGATCGTGATTGATATAACAGGGACTGTTTCTGTTTCGAGAAT
ATTAGTTAGAAAGCTAGATTTATTGAGTTCGTATACATAAAACTTACTTCGCTGAAAATT
TGATATGGATGACGACAGTAGCTGCGATTTGCGGAAGTGTTTGACAGACGGCCCTATGGA
TACTGACGAGGGTCCACTGATTAATGAAAATTCGAATGGTTTATCACATTTATTAACAGA
GGGAGAGTTTAACAGTGTCGATGCAGGTGTTGCTGATGAATCGTCTATATCTAATCAAGG
CTTTTTAAATGCCGTCGAACTGTCAGCTGGCAGCGTTGGCGATTACCTTGAAAATAATAC
TACTGGATTTAACGGAGACTCGTTTGACGTTGGCGACAACGCTGTCACATTTCCTAGTGA
TGCACTACATAATGAACTAGCCGATGAAAACTCTCTTCTCAGTGACGCTCCTGTTTATAA
ATCTTCTGAAACAAGTGTTGACCCTCCAGAGAAAGTGATGACAGACACTGACTGTGAACA
TACTAATGATAATGTAGTAGAAAATTCTACACCTTGTTTCCAACAGAATGAGGAAGTCAC
TGAATCAGAAAACAATATCAATGAACCTGATAAATTTAAGTCATCATTAGATAGTGAGTG
TGTTGCATTAGAAAACAAAGATAAGGAAGAAGATTCTGCACCAGTTGAAAGCAAAGAATT
ATCTACTGAAAATACCAAGATTGGTAGTGCAGAAGAAACTGAAGTTGTCTCTGAAGATGA
ACTTCCAGAAGTTCAGAAACCAAGCATCAAGGATGCAGAGAATGTGTCAGATGATGAACT
ACCTGGACCAAAACCTGCAGAACTTCCAGCTGATACTGAGGTTGTATCAGAAGACGAACT
CCCTGCATCAAAGAAAGAAATAAAAGAATCAAGAAAACGTAAATCTGAAGATGATAGAGA
TGGTTATGATCCAAGTTCACCAACATCAGAGAATGAATCATCTAATAAAAAACAAGCCAT
TGCGAAGAATGGCGAAAGTAAACCAATACCTGCTGAGAAGAGATTGTCTGTTGAAGAGAA
ACAAAAAAAGAAAACCCTACCAGAACTAGACAAGTACTGGAAGGTGGTCAATGATGATCC
GACTGACTTCACTGGATGGACATACCTCCTGCAGTATGTAGATCAAGAGAGTGATGTGGA
GGCGGCTCGAGAGGCGTACGACGCTTTCTTATCCCACTATCCTTACTGTTATGGATATTG
GAGAAAGTACGCTGATTATGAAAAGCGCAAAGGAAGTAAAAAGAAGTGCTTAGAGCAAAG
CTCCGAGGTCCACGAAGTTCCTATGCCAAAGTCTACGGTCACGCGGGAGTGTTTAAACCA
TCGCATACATTTATTAATATCTATTAATTTAATGTGGTGTATATTATTTTTTTTATCCTA
TAGTACATTTATTAATTATACTTTGTACATGCATGATGTTATTGTAATCTATATATACGA
ATATATTTTTAAATGTAAACTATTTAACTAAGTAAGTAAGGAGTGATTGGATATTATTAA
GTAATGATTAATATAATCCATGGTAGCATGGAACCCAGAGGATCTTGAACGTTTAGCCAT
TGTGTGGCGTTAGGAACTGAAGAACGAATGGAAGTTCAACGAGCATCATCCACGCCGATT
GTGAACAGGTGTAATATACCCAGTCA
(1826 bp)

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