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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37355_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX28_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0019843 F rRNA binding
GO:0035770 C ribonucleoprotein granule
GO:0042254 P ribosome biogenesis
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:1902775 P mitochondrial large ribosomal subunit assembly
Transcript
Level		FPKM:2.38 TPM:2.31
ORF EntryO_SariASG13374_5prime_partial:A_SariASG_c37355_g1_i3
Sequence
(Nucleotide)
TAAGGATCTAACACCGGTACACAGGAAGACCTTTGAGGAAATCAGCTTGAGTCCAAAACT
GATTGAGGTTATGGCCGAATTAGGTTTTACCTTACCTACTGCCATTCAAACTAAAGCTGT
ACCGTCAATATTAAAAGGGAATAATACGGTAATCACGGCTGAGACGGGATGCGGTAAAAC
ACTAGCTTATTTGTTGCCAATTTTTCAGCATATTTTGGAATGGAAGCCATACATACATGA
AGAATTTAACAGTCCATTAGCAGTAGTTATAACACCAAGTAGGGAGCTAGCATCACAAAT
AGCAGAAGTAGCTCAAACTGTGTCACAAAACCTTGATATAAGTGTCACATCACTCATCGG
AGGTAAAACCAAACAGAAAATGTTGGATCCACCAGTGGAATATTGTGACGTGCTTGTAAC
AACACTAGGTGCATACAGTAAACTTGTAACTACTGGTATATATAAAATTCATAATGTGCA
TCATGTTGTATTGGATGAGGCCGATACATTGTTGGATGACAGTTTTCTTGCTAAATTATC
ACATTTGATGCAGAAGTTTTCTATACAATATAAAGTTGACATTAAAGTACCTCCAGAGGG
TTGTCAGTTGACCCTAGTGAGTGCGACAATGCCCCATGAGTTGCCAGAAAGTGTCAACTC
ATTTATCGCTGCTGATTCCTTGAAAACAGTTACAACAACCAACATTCACAAAATTCTACC
TCATGTACCAAACAAATTCATACGTCTCGGCAAAGCACAGAAACCACTTGAATTGTTGAA
AATCGTTCGAGCCGATGTCAATCAGAAGAGACCAGTGATGATATTCAGTAACCAGACGTC
CACCTGTGACTTTGTTTCGATGTTCCTCAATGAAAACAACGTCGAGTGTATAAATATTAA
TGGCAAGATGGCTGTGCCGTTGAAAATGGGCAAATTTGAACTATACAAGAGCGGAAGAGT
TGGTGTACTCTCGTGCACTGATATCGCTTCACGCGGATTGGATACGACAATGGTAAGGTT
TTTTTAAGTTATTTTCCACTAGCTGCCCTACCTGGCATCGCCTGGGTTACTTTGTTAATT
GCCCATAAAAAATATTCAGGTCGTTCAAATCAGGAGAAAAACTATCCAATCTCTTAAGTT
GGACCAAATCACACGTTGTGTGGTATTTTATTAAGGGATCGTCCATTAATAACGTGAGGC
TTGAAAGGACGGAAATATAAAGAAATATAACAAGGAGAG
(1239 bp)

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