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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37345_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		uncharacterized_protein_LOC110382416_[Helicoverpa_armigera]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0072686 C mitotic spindle
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
Transcript
Level		FPKM:4.57 TPM:4.43
ORF EntryO_SariASG13360_5prime_partial:A_SariASG_c37345_g1_i2
Sequence
(Nucleotide)
GCGAGATGTTACAGCTAATAAAGATAGAGTTTTCTTTGAAAATGTACATGCATCACCAGT
CAGCGATTTTGCATATTCTCTCATAATAAAGATGTTATGATTTCTTGCGGTTATGATAAA
ATTATGAATGTGTATGATATCAGATTACAAAACACCGTATCAACTATAAAAACGTCATAT
ACGTTGACATCCCTTGCAATTAATACGGAAAATTTAGTGGGTCTTGGAACGAAAAATGGC
AATTTGTTGATATATGATTTAAGAGATTTCACTACTCCGTTAAAAGTACTGAAAGGACAT
GAAGAAGAAGTAGGTAAAGTAGCTTTTCAACCATTGATAAAGAAATTCATATCAGCTGAT
ATAAGCTTAAAAGAAGATTTAGATAAAAATGTATCTCCTACAAAAGTCAACTCACCTGTC
CGAACAAGAACTTCAGATATGTTTTTCATTAATGACACTCCGCCTAAAATTCAATTAGAT
GAACCAAACCAATGTGATACCAAACAAGACTCTTTCCTAATTATGATGGGTTTGGATAAA
ACGAACAATGATTTTGATGATGACATAAATAAATCACCAGAATATGAAAGGAGAAGTGAT
AAACATGAAATTAGATATAGGCAATTGGACATTGATAAAAACATAACTAAAGTGTCAACG
CCGCTAACAAATAAATCGGCAGATAATTTACATTTTCCATCGCCTATTCTATTAAACGGA
GTACCAGATGACGGCAGAGGATCAAATATAAATTTGTCAAATATTAAAAAAACTAACTCT
AGCAATTGTGTTGCAAATATTGAAGGTAAAATGGTTGAAGATCTCAAAGATTTCGTTAAA
TTGACATTAGCGGATGTAGCTGATGACAATAGAAATTCCTTTCTCCACATAATGATGGCA
TTGACGAAGCAGAAGTTGTTTTTGGAAAAGCAATTGTGCGGGTTAAATGAAAAGGTACAA
AATTTGATGCACAACCAAGAGGCATTATTAGAAACAAATAGAAAGTTGGCTTTAGAAATA
GAACAATTAAAAGGGAGAGAT
(1041 bp)

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