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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37341_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		general_transcription_factor_IIH_subunit_3_[Helicoverpa_armigera]
Ontology
GO:0000439 C transcription factor TFIIH core complex
GO:0003684 F damaged DNA binding
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006412 P translation
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008135 F translation factor activity, RNA binding
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0046872 F metal ion binding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:18.12 TPM:17.55
ORF EntryO_SariASG13350_5prime_partial:A_SariASG_c37341_g1_i2
Sequence
(Nucleotide)
AGTGTATATATTTTACTGATATTCGGAATAGTAACTTTAGAAAACAAAATGACAACAGAT
TCTGAAGATGTACCATCAGATAGCAGTGTCTTGGTTGTCATTGTGGACACTAATCCAAAC
CAACGATATATCATTGAAGATCCGAAAATACTTACAAATGTTCTTGATGCTGTAATTGCG
TTCGGCAATTCTCATTTGATGCAAAAATCCAGAAATGATATAGCCGTTATTGGATGTCAT
TTTCACAAAAGTGAATATTTGTATCCAAGTCCAGGGAAACCTCTAGATGTAAGACAAATA
GATGGCCAATATGAATTGTTTACACTAGTGGAAAAAACTGTAAAGACAAGGCTTGTGAAT
TTAATAAAAAGTCAACCTCAAGATGATAAAGCGGGAGAATCCTTATTAGCCGGTGCCTTG
GCTATGGCACTATGTTTTATTTCCAGGGTACGCGATCAGAGTCCACCAGGACTACGTGTA
AGCAGTAGGATCCTCATAGTAACAGGCAGCGCTGACGCCGCCACACAATATATCAATTAT
ATGAATGTATTTTTCGCTGCACAGAAACAACAAATACTAATCGATGTATGCTCACTGGAC
AAGCACTTAAGTCTTCTGCAGCAGGGTTGTGACATCACGGGAGGGCTCTACCTGAAGGTA
CCCAGCTTAGAAGGTCTCTTGCAATATTTACTGTGGGTATTCCTACCGGATTCGAGTGAA
CGCACTAAACTAGTGCTGCCGGGGCGCGGTCGGGTCGATTACCGGGCGGCTTGTTTCTGC
CACCACGAGCTACTAACCATCGGATACGTTTGCTCAGTCTGCCTAAGTGTTTTCTGCAAA
TTCAGTCCAATTTGCACAACTTGCCACACCGTTTTCAAATTCGGCGGTCCTTTGCCTATG
AAACCAAAGAAAAAGAAGATAAAATTATAATTAATTAATTGTAAAAAGCTGTAATATAAT
AAGTTTCAAAATTAAAAAAAAA
(982 bp)

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