SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37323_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_CCCH_domain-containing_protein_11A-like_[Papilio_machaon]
Ontology
GO:0000346 C transcription export complex
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031124 P mRNA 3'-end processing
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
Transcript
Level		FPKM:5.74 TPM:5.56
ORF EntryO_SariASG13308_complete:A_SariASG_c37323_g1_i2
Sequence
(Nucleotide)
TGAAAGTCCGCCACATGTCCGCCATATCTACTACATCTTCTTTCTAATATTGACGTTCAT
ATTATTTTATGTTCATTAGTACTGTTGTATAGATATTTATTTGTTAATTGGATTATTTTT
TAGTTAACCTATAACACGGCCTGAACGGCAGAAATCACCATGGAGTCACCACGAAAATTT
AACGACTGCTACTTCTATTATTACTCCACATGTACCAAGGGTGATAATTGTGTATTTCGA
CATGAGCCATCAGCTTTAGGTTGTGAAACAATGTGCACTGCGTGGCAGCAGGGTAAATGT
CTTGATAAACGCTGCAAACTACGACACATGGAATTAAGGAAAAACCGTAAGCAGATCCCA
TGTTATTGGGAGAACCAGCCTGGTGGCTGTCGCAAGATTCACTGCCCGTTCATGCACAAG
AACCCTGAAGCTCGCACTGATGGGATTGCACCTAGCCAGCCTGCTCCGCCTACACTTGGT
CAACCATTGAATGGACCAGACAACATCCCTATAGAACAGCCACAAGTGTCTGTAGGTGTG
AACCCAGGTATGGGTGGCGGGCCTCCCATCCCCACAGCTGTGCCTGCTCCGGTACCACTA
TTGTGGCAGCAACAGCGACAAGTGCTGGACAATGCCATCCTGGGGGTGCAGTTGTCCGCG
TCCCCAGACCTCCGTCACGTGTTGACCCCCCACGGGCATGCGCACGGGCACGCGCACGCG
CACGCGCATGCCCACGAGCCGGGACCCCCCAACCCTTACGCGCCGCTTCCAGTCGACCCC
CTAGTTGTCAACTTCGAGGAAGAGTCGGATAACGAAAGCGCTCCCTCCTCAACGCCGACC
AAACCCGCCTCCTCAGACGACGCCCAGAGAATAGCTCGGACTAAATCACAGGAGTTATTG
CTCCTAGAGAGGATTCAGGCGGAATCCGCCGCATTCTACAGCTACGACGTTATACCGCCC
ATAGAGGCGCCTAAAGAGCGTAAAATCGTCAGGACCAATCTAACATCGAAATACGACCGT
CTGTCGCTAGACGAGATATCAGGTAAGAAACAAGCGGTTACCGAGAGACGAAAGTCGTTA
GATTTTAAAATTTTATCATTAGATGAAATAAGAGCTAGGAAGAAAGACACTATAATAGTA
AACAGCAAACCGATTCCGATTAATCTGAGTAGGAAAAGAAAGTTGTCAACGCACGAAACC
ATGACGTCTGGAAATAAAATAATCAAAGTTGTTAGAAGCAATTCGATCGTGTATAAGAAA
GTCGATCATAACTCACCGGGAGTGTCGTCTGCTCAGAGTAAAATAGATCAGAAACCGTCA
GAAGGTGTTAGTAGAAAGCGAACGTTGTCCGAGCAAAGTGATATTTATGCAGTAATACAG
GACGAATTGGACGACAACTGTTACGAATTTAAAAAGGTTAAAATCACCGAGCAAACTTCG
AAACCTAGACTGATTAGGAACAGATTATCTAGCTTAAATAGAGGTAGTGAAGTCGATATT
ATCGGTAAGATTGATAACGATTCCGATTCTGAGGTGCAAATCATTAGTATAAATATGTCT
GAGGGGCAGGTCGACTTATCAAAATTATCGGATACAGAAGTAATAGATGTTGAAAACGTT
ATATTGGGTGATCCTGTTGATATAGTTGATTTGAGTGATGATACAGATGACAGTGACGTC
AATATAGGAAAGCTGGACTTAGATTTAGTTAAAAATGTACCTGATGTAGTAGCCAGTTGT
CAGCAGAGTAAGCACAAATATGATAGCACAGATGCAAATCTCATGAACGATATTAATACT
CTGTTAAATAACGAATTATGATTATAGCTCTACTTATAACAGTATATACACGAAATGAAA
CGTTAAGCGTTGCGTTTACTGTTATAATAATAGTAGTTATAACAATAGCAGAAGTTATCA
GTTTTTTGTAACGAAGAGAGAAATGTCACATCACTTTTAGAAGATCGCTAGGGTAGTGAA
AGTTTTATTTTACGTTATAATGATTAATATAAGCGTTGTGTTAGTTATTCATTAGTTTAA
AAAAAAATAATCAGCGGTTAGTGATTTTAATTTCGAATTTACCTAAGATTGGTAAAATGT
AATATTAATAACTTTTCGATACGGTTAAGCTAGTCG
(2136 bp)

- SilkBase 1999-2023 -