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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37222_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_endoribonuclease_Dcr-1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0046872 F metal ion binding
GO:0070578 C RISC-loading complex
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:3.38 TPM:3.27
ORF EntryO_SariASG13133_3prime_partial:A_SariASG_c37222_g1_i1
Sequence
(Nucleotide)
GCAAAAATAAGTGAATGTCATAAATTTTTACATGCTTAGGTATCAATCGTTTTGAGAAGT
AAAATAGTTATAGAAACAACATGTGTAGATTTTTGATACAACTATCTATAATTATAAATA
TGCTGTGAGTTTAATTAAATAGCTATTTTATTGTCATTGTAGAACTATAATCAGTACTTG
TGATTTTTTAAACAAAAACATGTATAAGTTTTGATATTTTATCGCCGACAAGTACAAAAA
TACAATATGATGGAACCCTGTTGTTCCCGTTTCACTGCGGCGGAGGGAGGCGCCAGGTTG
GCCGTCGCTGCTGGTAACCAAAATACCCTAGCAGTGGAGTATGCCAGTTTCATATCCACG
CGATTGATTTACGAAGAGGCCTATAAGATACGAGGTACCGTATTTGACGGCTACCAGAGG
TCAGTGTACGTTACTCGCCCCACCAGGGTGCAGTGCGTCGCTTACGAACTCAATACAATG
ACGGACCTTAAAACGGCACAAGCCTTAAAATACGACGATATCTACGACTGGAACGTGGAG
CTTGATAAGAAACAGGTACTCGTTTGTACTTCGGAGGTTCTGAAACAGATCTTAGAGGAG
GGAATTATAAAAATGGCCAACATAAATGTATTGATCGTGGACAGTTGCCATCGAATCTGC
AAAGATGACAATCTGAAATATATAATGTCACTATATAAATCATGTGAAGAAGAAAACCGA
CCGAGAATATTAGCTTTGACCTATCCTCTGTTCACATTAAACAAGAACGAAGCAAAATTA
CAGAAGAATCATGAGGTTAGTAATGATGATAGAAGTGAAGAACTCAATGAATCAACTGAT
GATCTTAGTAAGAAAACTAGTAGCAATGAAGGTGGTAAAGTAAGAGAAGAAGAAACGAGA
GTTGAGAAAGAT
(912 bp)

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