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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37166_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		decapping_and_exoribonuclease_protein-like_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006402 P mRNA catabolic process
GO:0008152 P metabolic process
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0034353 F RNA pyrophosphohydrolase activity
GO:0046872 F metal ion binding
GO:0050779 P RNA destabilization
GO:0071028 P nuclear mRNA surveillance
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:8.60 TPM:8.33
ORF EntryO_SariASG13052_5prime_partial:A_SariASG_c37166_g1_i4
Sequence
(Nucleotide)
TTTGAAACAAAGTTGGAAAAAGCTAAATTTTTCTGTTATCGAGGTCTTATGACTTGTGTG
GCTTGTACTCCTTATGAGAACAGAGAACCTTGGAAAATAGTAGTGATGCTTTGGAAAGGT
TCAATCTATTTGTGTGCAAGAGACACTGATGAAAAAAAATATAGAAAGCAAAATATGACT
GTAAAAGACAAAATATTCACTTCATGGGGATTTAAATTTGAACAGTATATGTTATCTGAC
ACACCTCATATAGAACCAAATCCAGATGTACCAGTTGATGAAACAGAAGAATTCTCATTA
GTTTTCACAACAAATCTGAGTCATCACTCAGTTGTTTATGGAGCTGAAATGGATGGAATT
CGATGTGATAAAGATCCCAAATTAACACCAATAATTAGTAGAGAGTTTGGTACTGAAGAT
ATAATCAATTATTTGTCTGATAAAGAATTTATTGAATTGAAGACAAATAGACAAATGGAG
CATCCAAAGCAAGAAACAAATTTTAGAAGATTCAAATGTAAAAAGTGGTGGTGTCAGTCA
TTTCTTGCTGGAGTTGATACTATCTTGTGTGGATTTAGAAACGATGAAGGAATTGTAGAA
GAATTAAAAGTTTTTCCTATTAAAGACTTGCCAAAAATATCTGAGAGATTTTGGAGTCCA
AATGTGTGTTTTAATTTTTTGGATACCTTCTTTACCTACGTAAAAAGATGTTTAGCAAGG
AAAATTAAATATAAATATGGTGATAAAGGATTAAATGATCTTCAATCTTTGCCAATGGTG
ACTTTATTGTTTGAGTGGTCTCCGGGTATGCCAGTGTGGGTTAATGAAAATTACAACTAT
GAAGATGATCCAATAATACCAGATTGGTTCCTAAAACAATATGCTTGTACTCAAAGATAA
CGAACGGTTCAAGTAGCTGGCTAATCCTGCACACACAACAGACTGCTAATGTATTTAGTT
GCGAAAACAGGAGCTCACTAACAAGTAACTCAAGGATAATATAACTATGTTACTTTATTT
AACAAGAGATTAACAAAATATC
(1042 bp)

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