SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37153_g2_i4
Scaffold_id
NCBI non-redundant
(nr)		AP-1_complex_subunit_gamma-1_isoform_X4_[Helicoverpa_armigera]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0019894 F kinesin binding
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0035646 P endosome to melanosome transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0043323 P positive regulation of natural killer cell degranulation
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0048471 C perinuclear region of cytoplasm
GO:0055037 C recycling endosome
GO:0090160 P Golgi to lysosome transport
Transcript
Level		FPKM:16.42 TPM:15.90
ORF EntryO_SariASG13046_complete:A_SariASG_c37153_g2_i4
Sequence
(Nucleotide)
GGGTAAAAGAGATAACGGGGACATGTCATATCTTACGTTTGTCAATAAACATTTCTTTAG
ACAATTTTAGTTGCAACATTTTGTTTGTATAGTATTTAACATTTTGACTTAGATTAAAAT
GTTATAAAATGTATACTTTAGTTCATGGTTTTTATAAATATGTCTTTCAGAAAGACGAAT
ATTGTGTACTAATATTAGGACTTGACAATGCAGGAAAAACGACGTATTTGGAAGCTACTA
AAACAAAATTTACTAAGAAGTATAAGGCAATGAACCCCAATAGGATAACAACAACAGTAG
GTCTAAACATAGGTAAAATAGATGTAGATGGAGTAAGACTTAATTTTTGGGACCTCGGTG
GTCAACAAGAACTCCAGTCTCTATGGGATAAGTACTATGCTGAATGTCATGCAGTAATTT
ACATAGTAGATTCATCTGATAGAGAGAGAGTTTCGGAATCAAAAGATACTTTTGACAGGA
TGATAGCTTCAGAACATCTGTCAGGTGTTCCACTTCTAGTGCTGGCAAATAAACAAGACA
TTCCAGATTGTATGGGTGTGCATACTGTGAAACCCATTTTTAATCAAAATGCACATCTTA
TTGGTGCTAGGGATATCATGCTAATGGCTACATCAGCTTTAAATGGAGATGGTGTTGACG
AAGGTATCAGATGGCTAGTGGACTGTATAAAGCGAAATAGCGTTGACAGGCCGCCGCGAA
ATCACGATGACAACAGTTTATAATATCAATAATGATGTATGCTACATACAATACTACTCC
AAAGTCATACAAATACAATGAATATTAATTAGTTATCCTATTAAGATAATATATGTGACT
CGTATGGATCATTGTTATGTACAGTATTGAGGTTTAAGAATAAAATATTACTAGAAGTGT
TATTGCTGTCCTGTTTCAGTGATAAATTGTACCTTTTGATAAGAGATACGCTGCGACTAT
TTGAGGAGTACCTGCACCTGATAAAACACCTCTGATAACAGTTCGGTTTGTGCTGTCGTG
ACATATTGTGGCATACTTTGTGAAATGTTTTTATTAAAACGTTTTTAGTATAAAAACTGT
GCGTTGTTTTAATTATTACCATGGCATATCCGATGTATGAAGTTGATTGGAGTGTTTTAC
CGCCAGAACAAAATAGAAGGTTCAACCCGGCTTTTAATATAGCCACCATTAAGCAAGTGG
TAAACGAGGCTATAGAAAGAGTGCGGATGCCCACGCCGACCCGCCTGCGGGACCTTATCA
GGCAGATCAGGGCTGCTAGAACCGCCGCCGAAGAACGAAGCGTCGTTAACAAGGAATGCG
CCTACATACGTTCGACCTTTAGGGAAGAAGACAGCGTTTGGAGATGTCGGAACATCGCAA
AGCTCCTTTACATCCACATGCTGGGCTATCCGGCACATTTTGGCCAGTTGGAATGTCTAA
AACTCATCGCGAGCCCAAGATTTACGGACAAACGTGTCGGATACTTGGGCGCCATGTTAC
TGCTCGACGAACGTCAAGATGTCCACCTCTTAATTACGAATTGTTTGAAAAACGATCTTA
ACAGCAACACTCAGTTCGTAGTCGGTTTAGCCTTATGCACTCTCGGGGCCATAGCCTCGC
CGGAGATGGCGAGAGACTTGGCCTCGGAAGTGGAGAGATTAATAAAATCACCGAACGCCT
ATATAAAGAAGAAAGCGGCGCTCTGTGCGTTCCGCATCATTCGGCGTGTGCCTGATTTAA
TGGAGATGTTCTTACCGGCGACCAGGAGTTTGTTGACTGAGAAAAATCACGGCGTTCTCA
TCACCGGGGTAACGCTCATCACAGAGATGTGTGAAAACAGCCCCGATACGCTCAATCACT
TTAAGAAGATTGTGCCAAATTTGGTGAGAATATTGAAGAATTTAATTTTGGCCGGTTATT
CACCGGAGCATGATGTCAGCGGCGTTTCCGATCCATTCCTACAGGTGAAAATACTACGCC
TTCTAAGAATATTAGGTAAGAACGATGGCGAATCATCGGAAGCCATGAACGATATACTCG
CTCAAGTAGCGACGAATACTGAAACGAGTAAAAACGTCGGCAATACGATACTCTACGAGA
CTGTTCTATCCATAATGGATATTAAATCCGAGAGCAGTTTGCGAGTGTTGGCTGTTAACA
TACTCGGACGGTTCCTCTTGAACAATGATAAGAACATACGTTACGTCGCTCTGAATACGC
TTCTAAGGACAGTGCATGTCGATACGTCGGCTGTCCAGCGTCACCGGACCACGATCTTGG
AGTGTTTGAAGGACCCGGACGTGTCGATTCGCCGTCGCGCCATGGAACTATCGTTCGCTC
TGATCAACGGTCAGAACATACGGAGTATGATGAAGGAACTGCTCACGTTCCTCGAACGTT
CCGATGCCGAGTTCAAAGCGCACTGTTCGAGCGCTATGGTCCTCGCTGCCGAGCGATACG
CGCCCTCGAACAAATGGCATCTAGACACCCTCTTCAGAGTACTACTCAAGGCGGGTAACT
ACTTGCGTGACGACACGGTCTCGAACACGCTACAGATAGTGTCGAGCGCGCCCACGGAGC
GACAGGCGTACGCCGCGATGCGTCTCTGGAGCTCTCTAGAACGTTCTGCGATCTCGGGCG
ACGCTACAGAGAAACAGCCACTCATTCAGGTAGCGGCTTGGACTATAGGCGAGTACGGTG
ATTTACTAGTATCGGAGGCGAGCAATGCCATTTCAATGGTCGATGAAGATGGAGTCGATG
ATTTCACGCGACCATCGGAGGAGTACGTGATCGATATCTACCAGAAGCTGCTCTGGTCGA
CGCAGCTGTCGATCACGACTAAGGAATACCTCCTGCTTTCACTGGCTAAACTATCTACAA
GGTTCACTACACAACCGAGTCAAGATAAAATCCGTGTAATAATAGACACGTTCGGATCTC
ACATCCACATTGAACTGCAGCAACGCGGCGTCGAACTCTCGCAACTCTATAGGCAGTACG
CGCACCTTCGGCCCGCTCTGCTCGAACGGATGCCGCCGATGGAGAGCGCAGCCGAAGCCG
AAGAGCGTCCGGACGCGCTCGACATCGACCACGGACCGTTATCCGACGCTACACCCGAAC
ACAAACCCGATCAGGATGCTCTATTGGACCTGATCATCGGATCTGATACTTTGACGAACG
GTGACATTGAGCATAAGTCAGAGCAGCCTGCATCTACCAATAATAATTCGAGCACTAATG
ATATACTGGATCTCTTGAGCGGTTTGGAATTAACACCGAGCACAATGCCCTCGGTCCCGG
CTTCGCTTCCGATCAGTTCAGGCGTCGGGCTGAACAACAACGCGCCGGCGTCATTACTGC
TAGACGGGCTCTTCCCACAGGGCAACCACCTGCCTACAATTACACCGCAAGAGTTACCAT
CGGTGACCGCTCTGGACAAGAACGGTGTTCGCATCGTGTTCGGTATAGAGCGAGGCGGTG
ATACTGTCACTCTCACTATGCGAGCCACCTCGGCTGTCTCCGCACTCACAGACTTCCTGT
TCCAGGCAGCCGTTCCCAGGACACTCCAGTTGGACATGATGTCTCCGTCAGGAACAGTGT
TGCCAGCACAGGGTGAGATCACGCAGGTCCTCAGAATCACTAACCCATCCAGAAGTCCAC
TACGATTACGGATACGCGTGTCGTACAACGTGGACGGTAACCCCGTGCTGGAGCAGACGG
AGGTGAACAGCTTCCCGCCGGAGCTGTTCAACTGACGCGTGGCGAATCCGCCCGGCTACT
GCCTCTAGCGATTCGCCGACGCGAAACGACATCTATCGGACGACAAGTGAACTATATCGA
ATAAATCAATCTACACGTGTTTTATTATCTGTCCCTATATAAACGATAGGAACTGTGTTC
TGTACAACTGTATCCGAATATCAGTTTACTAGTGTTTTATAATCTGTCCCTATAAACATT
TACACTGTACTCGGTACAACAGTCTGTATATAGGGGTTTTTTTGTGGGATCTCAGCGAGC
GTCATGTGGTAATTTTTAATTCATTAATCTGAGGTATTTGACTGGTGTCTATATTATGAA
ATTTTTGGTCGCGTTTTACGTGATATAGTTTGGTCATTGTGCACAATTAATAATAATGCA
AAATAGTTATTGTGAGGTGCCACGAAAATTACATGAAAACTTCTGGCAAGATTCCTAGAG
ATTAGAAATGTTGATACAAAATTGAAAATATACCGTTATCTACATGACACTGGCAGAATT
A
(4261 bp)

- SilkBase 1999-2023 -