SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37153_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		AP-1_complex_subunit_gamma-1_isoform_X7_[Helicoverpa_armigera]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0019894 F kinesin binding
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0035646 P endosome to melanosome transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0043323 P positive regulation of natural killer cell degranulation
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0048471 C perinuclear region of cytoplasm
GO:0055037 C recycling endosome
GO:0090160 P Golgi to lysosome transport
Transcript
Level		FPKM:10.98 TPM:10.63
ORF EntryO_SariASG13036_complete:A_SariASG_c37153_g2_i1
Sequence
(Nucleotide)
ACGGAAATGTCAGCTGGCGATTGTATTATTTCTCTACAATTATTGTGATAAAAAGTTGAA
TTTTGTTTAAAGTTTTTGCTTTGTGATAACAAATCTACTAAATATTTCACAAATGTTTAA
TTTAAGTTTTGATTAGAAGTGTAAAATATGAATGAAATTAGTCTGAGTTGGCGTGAGATT
TCACTTGCATTTCTATGGTTTATGACGAAATAAAATGCTTTTATGGTTGACTAAAAACGT
GTAAATTACTCTTGAGTTCCTTATAGTTATGATTTTAAAAGTAATTAAGTGATAATATTT
ATATTATAGTGTTTTTATAATACAGTTTTGAACTTTTCTTATACCTATTATCAAGAACAA
TTACGAGTACTCGTGAAAGGCGAAGAACTTTTGCATTGAGAAAAAAAAAGAAAGATTCTA
TAATCACACAATATGAACGGCTCCGAATCTGGGTTCAACCCGGCTTTTAATATAGCCACC
ATTAAGCAAGTGGTAAACGAGGCTATAGAAAGAGTGCGGATGCCCACGCCGACCCGCCTG
CGGGACCTTATCAGGCAGATCAGGGCTGCTAGAACCGCCGCCGAAGAACGAAGCGTCGTT
AACAAGGAATGCGCCTACATACGTTCGACCTTTAGGGAAGAAGACAGCGTTTGGAGATGT
CGGAACATCGCAAAGCTCCTTTACATCCACATGCTGGGCTATCCGGCACATTTTGGCCAG
TTGGAATGTCTAAAACTCATCGCGAGCCCAAGATTTACGGACAAACGTGTCGGATACTTG
GGCGCCATGTTACTGCTCGACGAACGTCAAGATGTCCACCTCTTAATTACGAATTGTTTG
AAAAACGATCTTAACAGCAACACTCAGTTCGTAGTCGGTTTAGCCTTATGCACTCTCGGG
GCCATAGCCTCGCCGGAGATGGCGAGAGACTTGGCCTCGGAAGTGGAGAGATTAATAAAA
TCACCGAACGCCTATATAAAGAAGAAAGCGGCGCTCTGTGCGTTCCGCATCATTCGGCGT
GTGCCTGATTTAATGGAGATGTTCTTACCGGCGACCAGGAGTTTGTTGACTGAGAAAAAT
CACGGCGTTCTCATCACCGGGGTAACGCTCATCACAGAGATGTGTGAAAACAGCCCCGAT
ACGCTCAATCACTTTAAGAAGATTGTGCCAAATTTGGTGAGAATATTGAAGAATTTAATT
TTGGCCGGTTATTCACCGGAGCATGATGTCAGCGGCGTTTCCGATCCATTCCTACAGGTG
AAAATACTACGCCTTCTAAGAATATTAGGTAAGAACGATGGCGAATCATCGGAAGCCATG
AACGATATACTCGCTCAAGTAGCGACGAATACTGAAACGAGTAAAAACGTCGGCAATACG
ATACTCTACGAGACTGTTCTATCCATAATGGATATTAAATCCGAGAGCAGTTTGCGAGTG
TTGGCTGTTAACATACTCGGACGGTTCCTCTTGAACAATGATAAGAACATACGTTACGTC
GCTCTGAATACGCTTCTAAGGACAGTGCATGTCGATACGTCGGCTGTCCAGCGTCACCGG
ACCACGATCTTGGAGTGTTTGAAGGACCCGGACGTGTCGATTCGCCGTCGCGCCATGGAA
CTATCGTTCGCTCTGATCAACGGTCAGAACATACGGAGTATGATGAAGGAACTGCTCACG
TTCCTCGAACGTTCCGATGCCGAGTTCAAAGCGCACTGTTCGAGCGCTATGGTCCTCGCT
GCCGAGCGATACGCGCCCTCGAACAAATGGCATCTAGACACCCTCTTCAGAGTACTACTC
AAGGCGGGTAACTACTTGCGTGACGACACGGTCTCGAACACGCTACAGATAGTGTCGAGC
GCGCCCACGGAGCGACAGGCGTACGCCGCGATGCGTCTCTGGAGCTCTCTAGAACGTTCT
GCGATCTCGGGCGACGCTACAGAGAAACAGCCACTCATTCAGGTAGCGGCTTGGACTATA
GGCGAGTACGGTGATTTACTAGTATCGGAGGCGAGCAATGCCATTTCAATGGTCGATGAA
GATGGAGTCGATGATTTCACGCGACCATCGGAGGAGTACGTGATCGATATCTACCAGAAG
CTGCTCTGGTCGACGCAGCTGTCGATCACGACTAAGGAATACCTCCTGCTTTCACTGGCT
AAACTATCTACAAGGTTCACTACACAACCGAGTCAAGATAAAATCCGTGTAATAATAGAC
ACGTTCGGATCTCACATCCACATTGAACTGCAGCAACGCGGCGTCGAACTCTCGCAACTC
TATAGGCAGTACGCGCACCTTCGGCCCGCTCTGCTCGAACGGATGCCGCCGATGGAGAGC
GCAGCCGAAGCCGAAGAGCGTCCGGACGCGCTCGACATCGACCACGGACCGTTATCCGAC
GCTACACCCGAACACAAACCCGATCAGGATGCTCTATTGGACCTGATCATCGGATCTGAT
ACTTTGACGAACGGTGACATTGAGCATAAGTCAGAGCAGCCTGCATCTACCAATAATAAT
TCGAGCACTAATGATATACTGGATCTCTTGAGCGGTTTGGAATTAACACCGAGCACAATG
CCCTCGGTCCCGGCTTCGCTTCCGATCAGTTCAGGCGTCGGGCTGAACAACAACGCGCCG
GCGTCATTACTGCTAGACGGGCTCTTCCCACAGGGCAACCACCTGCCTACAATTACACCG
CAAGAGTTACCATCGGTGACCGCTCTGGACAAGAACGGTGTTCGCATCGTGTTCGGTATA
GAGCGAGGCGGTGATACTGTCACTCTCACTATGCGAGCCACCTCGGCTGTCTCCGCACTC
ACAGACTTCCTGTTCCAGGCAGCCGTTCCCAGGACACTCCAGTTGGACATGATGTCTCCG
TCAGGAACAGTGTTGCCAGCACAGGGTGAGATCACGCAGGTCCTCAGAATCACTAACCCA
TCCAGAAGTCCACTACGATTACGGATACGCGTGTCGTACAACGTGGACGGTAACCCCGTG
CTGGAGCAGACGGAGGTGAACAGCTTCCCGCCGGAGCTGTTCAACTGACGCGTGGCGAAT
CCGCCCGGCTACTGCCTCTAGCGATTCGCCGACGCGAAACGACATCTATCGGACGACAAG
TGAACTATATCGAATAAATCAATCTACACGTGTTTTATTATCTGTCCCTATATAAACGAT
AGGAACTGTGTTCTGTACAACTGTATCCGAATATCAGTTTACTAGTGTTTTATAATCTGT
CCCTATAAACATTTACACTGTACTCGGTACAACAGTCTGTATATAGGGGTTTTTTTGTGG
GATCTCAGCGAGCGTCATGTGGTAATTTTTAATTCATTAATCTGAGGTATTTGACTGGTG
TCTATATTATGAAATTTTTGGTCGCGTTTTACGTGATATAGTTTGGTTATTGTCCAAAAG
TTAAGTGTATTGGTGATTATCACACGAAACGTGAATTCTGAAATCATCCAAAAACTCCCT
TGGAATGACAGCTTTAACAAAGGACCGCCATTTTGTTAGAGTTTTGTATAAGTGTTCCTA
ACGTCAGACTTGG
(3553 bp)

- SilkBase 1999-2023 -