SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c37013_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cryptochrome-1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0009881 F photoreceptor activity
GO:0018298 P protein-chromophore linkage
GO:0042622 C photoreceptor outer segment membrane
GO:0048511 P rhythmic process
GO:0050896 P response to stimulus
GO:0097381 C photoreceptor disc membrane
Transcript
Level		FPKM:0.88 TPM:0.85
ORF EntryO_SariASG12805_complete:A_SariASG_c37013_g1_i2
Sequence
(Nucleotide)
GTTAATTGTCATTTACAAATATTATATAGAACCTTTTCAAAAGTTACGATGATAATTGTG
TAATGTATAACCACTTGTAAATAATACAATTTTCAGAATTTCTCTAATATGTCAGTGGTT
CCTTCAGTTATCCATTGGTTTCGTTTAGACTTACGTATACATGACAATCTTGCTCTACGC
AATGCAATAAACGAGGCTGAAAACAGAAAACAGTTTTTGAGACCTTTGTATATAATCCAC
CCTAATATTAAGCTAAAACTAGGTGGGAATCGTCTACGGTTTTTAATTCAGAGCTTAAAC
GACTTGGATGATAACTTGCGGAAGTTAAATTCACGTCTCTATGTTGTGAAGGGTGAGGTA
GCTGACCTTTTACCAAAATTATTTGATGAATGGAAAGTCAAGTACCTGTCATACCAAGTA
GATATTGATCCTGAATTGGTACTTTTAGATGGACAGATTGAAGAGATTGCCAATGAAAAA
GACATATTTATAAATAAAAGAGTACAACACACAGTGTATGACATACACAATATTTTAAAA
AAGAACAATGGAGCTGTTCCTCTGACATATCAAAAATTTCTTTCTTTAGTAAAAGATGTG
CATGTGAAGGAATGCATTGAAATATCAAAAAAAATATCTGATCACTGTAAACCACCTGAT
GAATGGTCTAAGGATTATGATGTTCCAAGACTGGATGAGTTACAACTTGACGAGATGACT
CTACAACCTACTAAATATCCAGGTGGTGAAACAGAAGCTATCAAAAGACTTAATTTGTAT
ATGTCTAGAAAACAATGGGGCAATTGATGTGGAGAGAATTTTATTATACTGCAGGAGCTG
GTACAGAAAACTTTGATACAATGGTAGGGAATAAACTTTGCATACAGATACCTTGGGGAA
ACAATAATGAACATTTAAAAGCATGGGCTGAAGGGAAGACAGGTTATCCTTTTGTAGATG
CTATAATGAGGCAGTTAAAGCAAGAGGGTTGGATCCATCATTTAGCCAGACATATGGTAG
CATGCTTTTTAACAAGAGGAGATTTGTGGATATCTTGGGAAGAAGGAGCTAAGATATTTG
AAGACTATCTGCTTGATTATGATTGGTCTTTGAATGCTGGTAATTGGATGTGGTTATCTG
CATCTGCTTTTTTTTACAAGTATTTTAGAGTATATAGTCCTGTAGCTTTTGGAAAGAAAA
CTGACAAAGAAGGTTTATATATAAGGAAATATGTACCAGAGTTGAAAAAATATCCAGCAG
AGTATATATATGAACCATGGAAGGCACCACAATCAGTTCAAAAGGTGGCAGAATGTGTTA
TCGGAGAAAAGTATCCTAAAAGGATTGTGGATCATGATAAAATACATAAAGAAAATATAC
AAAAAATGTCTATAGCTTACAAAGTCAACAAAGAGAGAAAAGCAGTAAAAAGACCTATAT
CATGAATTTATAACTTCAACCTATAGTGCC
(1470 bp)

- SilkBase 1999-2023 -