SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36977_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		histidine--tRNA_ligase,_cytoplasmic_isoform_X3_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004821 F histidine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006427 P histidyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0032543 P mitochondrial translation
Transcript
Level		FPKM:29.44 TPM:28.51
ORF EntryO_SariASG12743_complete:A_SariASG_c36977_g1_i2
Sequence
(Nucleotide)
CTCTACGTTGAAGTTTGAACAAGATATAACCTAAAAACACAGTGAGTCGTGGATACTTTC
AAAGCGTGATTAAAAATGAAAGGGACTATACCGAGTGGCTAAGTTGCAATTATTTCTAAG
TACTTTTACTTGCGTGACTTTAGCCTTGAAATAAAGGTCGAATATTTTTGTAGCTCAGTT
TCAAATAATAAATAGGTAATAAATTATGGCAGATTCTCAGGAAACTATATTGTCAAAAAT
AAAAGAACAAGGAGATCTTGTAAGGAAATTAAAGGCGACGAAAGAGTCTAATGAAAAGAT
TCAAGAAGAAGTATCAAAGTTACTCGCTCTTAAGGCACAACTCGTCACCGAGGATGCAGG
TCCACAGAAATTTGTCCTTAAAACTCCAAAGGGCACCCGAGACTATAATCCACAACAGAT
GACAATAAGAAACGATGTGCTTCAAAAAATTATTACAGTATTTAAGAGACATGGGGCAGA
GTGTATAGACACACCTGTTTTCGAATTAAAGGAAGTATTAACTGGGAAATATGGTGAAGA
TTCAAAATTGATTTATGATTTAAAAGATCAAGGTGGAGAAATTCTATCCTTGAGATATGA
TTTGACGGTACCGCTAGCCAGATACTTGGCAATGAACAAAATTACTAATTTAAAGAGGTA
TCACATAGCAAAAGTATACAGACGGGATAATCCAGCTATGACCAAAGGAAGATATAGAGA
ATTCTATCAATGTGATTTTGATATAGCAGGTGCATATGACCCAATGGTTGCGGATGCAGA
ATGTCTAAAAGTAGTAACAGAGATACTAGACAGTTTAAATATTGGGCAATATATCTTGAA
GGTTAATCACAGGAGGCTACTCGATGGAATGTTTGAAGCTTGTGGTGTCCCTGCGGATAA
ATTTAGAACTACTTGTTCCACCGTTGATAAGTTGGATAAGTCGACATGGGAAGAGGTGAG
AACGGAAATGATAAACGAAAAGGGTGTCACACCCTATTCTGCTGACCGGATAGGCGAATA
TGTATGTCTGAACGGGGGAAAGGAATTAACTGATAAACTATTGAAGGATGAGAAGTTGTC
CAAAACTAAAGCAGCGGTCGAAGGTCTCGAAGGAATCAGAACGTTGTTGGAATATTGCCA
ATTGTTTGGAATCAGCGATAAGATAATATTTGATCTCAGTTTAGCCAGAGGCTTGGATTA
TTACACCGGTGTTATCTATGAAGCTGTTTTAACACAGCCAATAAAAATAGGAAATGAAGA
ACAGACCGTTGGATCTATCGCCGGTGGCGGTAGATATGACAACCTTGTCGGAATGTTCGA
TGCGAAACATAAGCAAGTACCATGTGTTGGCGTCAGTATAGGCGTGGAGAGAATATTCTC
AGTACTAGAAGCCAAGTTGGCTGTAGGAGAAATAACCGTACGAACAAGTGATATCGACGT
GTATGTGGCTTCAGCGCAGAAGAACTTCTTGGAAGAACGTATGAAGATATGCGCCGAGTT
GTGGAATGCCGGAATAAAGACTGAGCACTCCTACAAGAAGAATCCTAAAATGCTAAACCA
GCTTCAACATTGCGAAGAAAACGGTATTCCTCTAGCCGTTGTGCTCGGCGAGTCAGAGTT
AAAGAGGGGAGTCGTCAAGATAAGGGACATCAAAACACGTCACGAGGAAGAAGTGCCAAG
GGAGAATCTTCTTCAAGAATTACAGGCGAGAATCGCTCGTCTTAGTGTAAATCCTATTAA
CGGTGCGGCGTAAAGTAAATTACACTTTACATAATTGACGGGCGGATAAGCAAAATATGG
TGTCAACCCCCTTAAAATAAACGAAAAAAAGAAGATTTTTCTGAGTCAAACGCAAGATCA
CATAAGGACGTACATATTACAAAATACAGACGAATACTTTATATAAATATATGTATATTC
AAACATAAATATACAGACATACATTTATAAAAGTATATACTTAGATAACAGGTTAAGAAT
GTTAGTGTGACAGGATGGTTCTGATGACTGACATTATATTTCTAGTTAAAAAAAAAACAG
TTTTCAATCAAAAGAATTTCAGCAAAAGCGTATTAGCATGTTATATACTTACCATAAAAT
TATCTGTATTTTTTTTAATATAATTATATTTTAATCAATGTTATAAAAAAATTCAAACCA
GTTAAAGTCTATTCGTAATTTATAATTTTATAAAAAAATGTTCTAAACGTTAACTGCCCT
TTTCTCAAAATAGTGCTTATCAATGTTCATTATAACACATAAAAAAATTACCCTACTTAG
TATACCAGTATATATTATACAGTTTTACTGTTATGTAATATTTTTTTTTACTATTATTGC
CCAAATTACGGCCTCTAAGATGTAGTTAGATTAAAATGCCAGCTGTCAACAAATCGAAAT
AAAAATAGTGTGTATACAGAGTAGACGTGTCAGAAGCGAAACTTGGCTTTTATATCTGTT
TGTAGACTTTTTCTAGATTTCCGAAAGTTCCTAATGAACTGTATGGTGACTTACAGTAAT
TACATTACGACGTAATAATAAAAACTGAAATGAACGTTCCATTGATGTTTTATTTCGTAT
CGCTGTAATATGTATGTGAATATTATAATTACCAAAAAGCAAATAGTTAGTTCCGGAATC
ATTTACATTTTTACTGTCAATAAACACTTTTTCAAAGTTTATTTTCGTGATAACCTCATG
AATATTAATAAAATAATTGTCCTGATTGGTCCAGCCGTTGTCATGCGAAGTGTTAACCAA
CGGATAGCATTTGATTTTATTTTATATATTATAAGTTACTAAGATAACTTCATAAACGTT
TTACGATAGTTTATTAAAATATTTAATAAGGTAATCAATTAGGTGTTTGAAATGAATATT
TGTTTTAGTTTATTCACGACGGT
(2903 bp)

- SilkBase 1999-2023 -