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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36797_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		geranylgeranyl_pyrophosphate_synthase_isoform_X1_[Bombyx_mori]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005737 C cytoplasm
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.59 TPM:1.54
ORF EntryO_SariASG12420_5prime_partial:A_SariASG_c36797_g1_i4
Sequence
(Nucleotide)
TCTCTACTCCACAGCCCACGTCTGTAATCAGTTGGGTTTACAAATGTCAGTGTCAAGTAA
ATACTGTGAGGGAAATCGATTTTCTTGTAATTTTATGGACAATATTTTACTTGAATTAAA
CACGTTAGAAATGTCTGAAATTATAAATAAGAGCAACGAAAAATATCCAGACGACAAAAT
CCTAATGCCATACACTTACATCCAACAAGTACCGGGCAAACAAATTCGCGCGAAACTCGC
ATCAGCTTTCAACTATTGGTTAAAGATATCCGATGAGAAACTTCGAGCCGTCGGTGAAAT
TGTCCAGATGCTGCACAACTCTAGCTTACTGAGTGTGTTCGTCCCTAAGGGCAGCGAGTG
CAGTCGTGCCCGGATCGATGATATTCAAGATAACAGCATTCTGAGACGGGGAATCCCGGT
GGCCCATTCGATTTATGGGGTCGCTAGCACAATCAACGCTGCTAATTATGCGATGATAAT
CGCCCTACAGAAAACTTTGGAATTAGGGCATCCTATGGCTATAACAGTATGCACTGAACA
GCTTTTAGAACTGCATCGAGGTCAGGGTATGGAGATATATTGGCGTGACAATTTCCAATG
TCCCTCCGAAGAAGAATACAAGGATATGACAATCAAAAAGACCGGTGGCCTGTTCATGCT
AGCCATACGTTTGATGCAATTATTTAGTGAAAACAAATCGGACTTCAGCAAAATAACCGC
CATCCTCGGACTGTACTTTCAAATCAGAGACGACTACTGCAACCTCACTGAGAAAGAGTA
CACTGAAAACAAGAGTTACTGTGAAGATCTTACAGAGGGTAAATTCAGTTTCCTAATCAT
ACACGCCATCAGGAATCAAGAGGGAGACAACCAAGTGCTTCACATATTAAGGCAGAGGAC
TCGTGACGTTGAAGTGAAGCGATACTGCGTCACATTGCTGGAGAAACTTGGCAGTTTTCA
ATATACACGACAGATATTGCAAGCACTCGACCAGGAGGCCAGGAATGAGATTATAAGATT
GGGAGGTAACCCACTTTTAGAAGCTCTTTTGGACGATCTCCTGACTTGGCGCATCGAGGG
AAAGGATTCCGTAGTTGAGACAAACCACGTTTAGGCATTAAGACAATAAAATATTAATAA
AATGTACATCTCCCAGTGCACTATATCGATAATGATAAAATCATTAAAGTATGGTTCTCC
CTTTTATATAGTTTCTCGAGTGGAGATACCATCCAAAGTTACTGTTTTTTTATGCTTAGG
TTATTACATACTTACATATAGACAGGTTTTTGATGTGAAACATCTATAG
(1309 bp)

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