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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36676_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_Bre1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006513 P protein monoubiquitination
GO:0006909 P phagocytosis
GO:0007219 P Notch signaling pathway
GO:0007422 P peripheral nervous system development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016570 P histone modification
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.58 TPM:3.47
ORF EntryO_SariASG12168_complete:A_SariASG_c36676_g1_i3
Sequence
(Nucleotide)
TGTAAATTTTGGGGTGGAGTAACTACTGTAACTAGCATCAGGAGCATCTCTTAATTTTTT
ATTGTAAGGGTTGTTAGTTGTCAGTCACAATGAATTATCTGAGCGTTATAATAACAGAAC
TTTATTTTGTAAATTGACTTACTGGAGTAAAACAATAAATTCCAGGTTGTCAATATTGAC
AATCGAGCGAGTTTTGTAGGTCAAGATGTCGAAACGTGCAGCTGAAGATGGTAGCAATGG
AAGCAGCCAGCCTCCAATTAAAAAAGTTCACTTCGAACCTCATCTCATAGGTCCAGTATC
CACTCTTGAAGAAATGGACATAAAAGTTCTGCAGTTTCAAAACAAAAAATTGGCTCAGAG
AATCGAACAACGTCACAGATGTGAAGCAGAATTACGAGCTAGGATTGAACAACTAGAAAA
GCGACAGACCCAGGACGATGCTGTGTTGTGTGTTGTGAATAGATATTGGAATTTGTTGAA
TGAAGACATAAGAGTTTTATTGCAACGTTTTGATGCTGAGACTGCAGATGAATCAGAAAA
CAAAAATGAGAATGAAGCAACAACTTCGTTCTTAATGCAACTTTCAACGTGGGATAAAGA
GGAATTGGATGCACAACTTGCAAACCGTGTACAAGTGAGCAAGAGGGCTGTAGCAAAAGT
TTTACAAGCATTTGACAGGTTACAACAGAGGAATGATAAAATATGGCGGGCTATTAAAGG
TGAAGGGGAAGAGGGTGGGCCGGCTCCTTCACTGGACGAAGTGATCCGTGCTACGAATGA
GGAAGTCACAGTTGAGAATTGTCGCCTCCAGGCTTTGTGCACCACGTTGCATGAGAGTCA
CCACGCTATGACATTACGGGTTGCAAGATTGCAGGATGCTGTTAATAGTAGAGATACAGA
GAATGCGGAATTAAAAAATCAGATTGACGATCTGCAGTATGAACTCATGAAGGTGCGTTC
GCGGAATGACAAGCTGGAGAATCACCTTGCAGAGGCGATAGAGAAGTTGAAGAGTTACCA
TCAGTCGGGCGCGAACCCCGCGTCGTCGGCGTCGGGTGCCGGCGCTAGTGCCGCGGCACC
GACGAGCGCTACTAACGCTAAGCTTGAAGATGTTGCTGCTGAATTGGAAGAGCAACGGGA
ACTCGCCAACAATCGTCTCACAGAATTAGATCGGCTACATAGACAGCACAAGGACTCGCT
GAAGGAAGTTGAAAAACTGAAAATGGACATCCGTCAGCTGCCTGAGTCGGTGATAGTGGA
AACGACCGAGTACAAGTGTTTGCAGAGTAATTTCTCTGTGCTCTACAATGAGTCTATGCA
GATTAAGACTGCGCTGGATGAAACGCGACTTCAGCTCCAGAACGCTAAGAATTTGCACAT
GCGTCAATTAGAAATTATGGAAAGCGAAGAATTAGCCAGACAGAAAGCCCTACGAGCGGA
AATGATACAACTGGAAGATGTTCTCGGGCAGCTTAGGAAGGAGTACGAAATGCTGAGAAT
AGAATTTGAACAAAATTTGGCGGCCAACGAACAGACCGGCCCTATCAATAGGGAGATGAG
GCATCTAATTACCTCCCTCCAGAACCACAATCAACAGCTCAAGGGCGAAGTTCACAGATA
TAAGAGGAAATATAAAGATTCTAGTCAAGAATTGAATAAGGTTAGGAAGGAGTTAGAGGA
TGCGAACGCGAGGGGGGGCGGGGCCGCGACGAGCGAACAGACGGATGAGAAACCACTTGT
CGTCAAAAAAGAAGAACCTGATCCGGAGTGCGAGGAAGGCGGTAGTGCGACGGACGTGAA
GGGGGCGCAGCCCAACCCCCACAACCGCGCCAAGATACAGGAACAGGATCAGGTCATCAA
GGATCTCAAACAGCAACTCAAGAAAGCCGTGAATGAGCAGAAAGAGTTGAAATTACTACT
GGACATGTACAAGGGCGTCAGTAAGGAGCAACGTGATAAAGTGCAGCTGATGGCGGCCGA
GAGGAAAGCGCGCCAGGAGCTGGAGGATCATCGCCAGAAGGCGAAGATGGCTCAGGAGAG
CAAACGAGAACGCCGGCTCGCTGACGAGGACGCCCTGCGTAAGATCAAACAGCTGGAGGA
GCAGAAGTACGAGCTCCAGAAGCAGTTGTCCTGCGCCAGGCCCAACGCTGACCCTCTGCA
CGCCTTCTCGAGACCATTCGCCGGATCACCGGAAGAGGAGGCGCTCCTGAACGAGATGGA
AGTGACTGGGCAAGCGTTCGAGGACATGCAGGAGCAGAACTCGAGGCTGATCCAGCAGCT
CCGGGAGAAGGACGACGCTAACTTCAAGTTGATGTCGGAACGTATAAAGGCAAACTCTCT
GCACAAGCTGCTGCGGGAGGAGAAGCAACTGCTGCAGGAACAGTTGGTGACTAGAGATCA
GCAGATCGAGTCTATGGGCGGTGTGGCTCGGAGGCTGGAGGAGAAGGAGCGGCTGCTGCA
GTCGGCGCTCTCAGCCGCTGAGAAGGAACTGCTGCTCCGCCAGCAGGCGATGGAGATGCA
CAAGCGCAAAGCCATCGAGTCCGCCCAGTCCGCTGCCGATCTTAAACTGCATCTCGAGAA
GTATCACGCGCAGATGAAAGAGGCGCAACAAGTCGTCGCTGAGAAAACGAGCGCATTGGA
AGCCGAAGCTTATAAAACAAAAAGACTCCACGAGGAGTTGGCCATACTGCGGCGTAAAGC
CGAGAGGATGAAGAAGATGGAGCAAGCGGGCAGTAGCATGGACGAGGTGCTGCTCGAGGA
GATTAGAGAATACAAGGAGACGCTCACCTGCCCCTCATGCAAGGTAAAACGTAAAGATGC
GGTCCTCACGAAATGTTTCCACGTGTTCTGTTGGGATTGCCTCCGGACGCGGTACGAGAC
GCGCCAGAGGAAATGTCCCAAGTGCAACGCGGCCTTCGGAGCTAACGATTACCACCGGCT
TTACCTCTCTACATAAACCCCTCTCCCCTCCTCTTCCCCTCCCTTAACCTCCATTCACAT
TACGAGTTTTTTCCATCAAAATTATGACGCTTGTCTCAATTAAGTAGTCAAAGAGGTTAT
ATCGAATCATCCCTACGGATATCTGTTTCGGTTACGTTATTTTTCGTATCTCACACATAC
AGACACGGATGTCAAATTTTGGTGTAATATTAATTTACCGATATTTTTAACATGTGTATA
TATTAATATTAAAATCGATATCGATAAATATCGTACGGCAACGGCG
(3226 bp)

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