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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36676_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_Bre1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006513 P protein monoubiquitination
GO:0006909 P phagocytosis
GO:0007219 P Notch signaling pathway
GO:0007422 P peripheral nervous system development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016570 P histone modification
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:10.51 TPM:10.18
ORF EntryO_SariASG12166_complete:A_SariASG_c36676_g1_i1
Sequence
(Nucleotide)
CGTAGTTATAGTTTGGTTTTTGAATAAACATAATTGTTGTCATTTTATTCTTTATTTCTA
GTTTTGTAGGTCAAGATGTCGAAACGTGCAGCTGAAGATGGTAGCAATGGAAGCAGCCAG
CCTCCAATTAAAAAAGTTCACTTCGAACCTCATCTCATAGGTCCAGTATCCACTCTTGAA
GAAATGGACATAAAAGTTCTGCAGTTTCAAAACAAAAAATTGGCTCAGAGAATCGAACAA
CGTCACAGATGTGAAGCAGAATTACGAGCTAGGATTGAACAACTAGAAAAGCGACAGACC
CAGGACGATGCTGTGTTGTGTGTTGTGAATAGATATTGGAATTTGTTGAATGAAGACATA
AGAGTTTTATTGCAACGTTTTGATGCTGAGACTGCAGATGAATCAGAAAACAAAAATGAG
AATGAAGCAACAACTTCGTTCTTAATGCAACTTTCAACGTGGGATAAAGAGGAATTGGAT
GCACAACTTGCAAACCGTGTACAAGTGAGCAAGAGGGCTGTAGCAAAAGTTTTACAAGCA
TTTGACAGGTTACAACAGAGGAATGATAAAATATGGCGGGCTATTAAAGGTGAAGGGGAA
GAGGGTGGGCCGGCTCCTTCACTGGACGAAGTGATCCGTGCTACGAATGAGGAAGTCACA
GTTGAGAATTGTCGCCTCCAGGCTTTGTGCACCACGTTGCATGAGAGTCACCACGCTATG
ACATTACGGGTTGCAAGATTGCAGGATGCTGTTAATAGTAGAGATACAGAGAATGCGGAA
TTAAAAAATCAGATTGACGATCTGCAGTATGAACTCATGAAGGTGCGTTCGCGGAATGAC
AAGCTGGAGAATCACCTTGCAGAGGCGATAGAGAAGTTGAAGAGTTACCATCAGTCGGGC
GCGAACCCCGCGTCGTCGGCGTCGGGTGCCGGCGCTAGTGCCGCGGCACCGACGAGCGCT
ACTAACGCTAAGCTTGAAGATGTTGCTGCTGAATTGGAAGAGCAACGGGAACTCGCCAAC
AATCGTCTCACAGAATTAGATCGGCTACATAGACAGCACAAGGACTCGCTGAAGGAAGTT
GAAAAACTGAAAATGGACATCCGTCAGCTGCCTGAGTCGGTGATAGTGGAAACGACCGAG
TACAAGTGTTTGCAGAGTAATTTCTCTGTGCTCTACAATGAGTCTATGCAGATTAAGACT
GCGCTGGATGAAACGCGACTTCAGCTCCAGAACGCTAAGAATTTGCACATGCGTCAATTA
GAAATTATGGAAAGCGAAGAATTAGCCAGACAGAAAGCCCTACGAGCGGAAATGATACAA
CTGGAAGATGTTCTCGGGCAGCTTAGGAAGGAGTACGAAATGCTGAGAATAGAATTTGAA
CAAAATTTGGCGGCCAACGAACAGACCGGCCCTATCAATAGGGAGATGAGGCATCTAATT
ACCTCCCTCCAGAACCACAATCAACAGCTCAAGGGCGAAGTTCACAGATATAAGAGGAAA
TATAAAGATTCTAGTCAAGAATTGAATAAGGTTAGGAAGGAGTTAGAGGATGCGAACGCG
AGGGGGGGCGGGGCCGCGACGAGCGAACAGACGGATGAGAAACCACTTGTCGTCAAAAAA
GAAGAACCTGATCCGGAGTGCGAGGAAGGCGGTAGTGCGACGGACGTGAAGGGGGCGCAG
CCCAACCCCCACAACCGCGCCAAGATACAGGAACAGGATCAGGTCATCAAGGATCTCAAA
CAGCAACTCAAGAAAGCCGTGAATGAGCAGAAAGAGTTGAAATTACTACTGGACATGTAC
AAGGGCGTCAGTAAGGAGCAACGTGATAAAGTGCAGCTGATGGCGGCCGAGAGGAAAGCG
CGCCAGGAGCTGGAGGATCATCGCCAGAAGGCGAAGATGGCTCAGGAGAGCAAACGAGAA
CGCCGGCTCGCTGACGAGGACGCCCTGCGTAAGATCAAACAGCTGGAGGAGCAGAAGTAC
GAGCTCCAGAAGCAGTTGTCCTGCGCCAGGCCCAACGCTGACCCTCTGCACGCCTTCTCG
AGACCATTCGCCGGATCACCGGAAGAGGAGGCGCTCCTGAACGAGATGGAAGTGACTGGG
CAAGCGTTCGAGGACATGCAGGAGCAGAACTCGAGGCTGATCCAGCAGCTCCGGGAGAAG
GACGACGCTAACTTCAAGTTGATGTCGGAACGTATAAAGGCAAACTCTCTGCACAAGCTG
CTGCGGGAGGAGAAGCAACTGCTGCAGGAACAGTTGGTGACTAGAGATCAGCAGATCGAG
TCTATGGGCGGTGTGGCTCGGAGGCTGGAGGAGAAGGAGCGGCTGCTGCAGTCGGCGCTC
TCAGCCGCTGAGAAGGAACTGCTGCTCCGCCAGCAGGCGATGGAGATGCACAAGCGCAAA
GCCATCGAGTCCGCCCAGTCCGCTGCCGATCTTAAACTGCATCTCGAGAAGTATCACGCG
CAGATGAAAGAGGCGCAACAAGTCGTCGCTGAGAAAACGAGCGCATTGGAAGCCGAAGCT
TATAAAACAAAAAGACTCCACGAGGAGTTGGCCATACTGCGGCGTAAAGCCGAGAGGATG
AAGAAGATGGAGCAAGCGGGCAGTAGCATGGACGAGGTGCTGCTCGAGGAGATTAGAGAA
TACAAGGAGACGCTCACCTGCCCCTCATGCAAGGTAAAACGTAAAGATGCGGTCCTCACG
AAATGTTTCCACGTGTTCTGTTGGGATTGCCTCCGGACGCGGTACGAGACGCGCCAGAGG
AAATGTCCCAAGTGCAACGCGGCCTTCGGAGCTAACGATTACCACCGGCTTTACCTCTCT
ACATAAACCCCTCTCCCCTCCTCTTCCCCTCCCTTAACCTCCATTCACATTACGAGTTTT
TTCCATCAAAATTATGACGCTTGTCTCAATTAAGTAGTCAAAGAGGTTATATCGAATCAT
CCCTACGGATATCTGTTTCGGTTACGTTATTTTTCGTATCTCACACATACAGACACGGAT
GTCAAATTTTGGTGTAATATTAATTTACCGATATTTTTAACATGTGTATATATTAATATT
AAAATCGATATCGATAAATATCGTACGGCAACGGCG
(3096 bp)

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