SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36602_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		nesprin-1_isoform_X1_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:7.31 TPM:7.08
ORF EntryO_SariASG12044_internal:A_SariASG_c36602_g1_i1
Sequence
(Nucleotide)
GTTCAACAATGGCTGACAACTGCTGAGAAGAGTCTACCAAAAGAAATCGAATTGAAGGCA
ACATTAGATGAGAAACGAAACCAATTAAACGTATATAGAACATTCTTACAAGATGCCATC
GCCCATCAACAAGATATATTTGATTTAGAAACTCGTGCTCAGGGTCTCCCCGATGTTAAC
AAAGATATAACTAAAGAAATAAATCAGTTGAAACAACGTCATGAAAGCATTCTGAATAGA
GCCAAATCCTTCGTAGAACAATACGAAGCCATTGTAAACAACCATCAGCAGTACACTAAA
GCTGTGAAGGACCTAGAAGAATGGATAGAGGCTACACATAATACTGCACAACTATGGGGC
GATGTAAACTTGGAACGTGTCGCCTTAAGCAGCAATTGTGAGAAATTAAAATCACTGCAG
GTTAATTTGCCAGAAGAGAAAAATCGTATTGATAAGATTCGTATTTTGGGTGAAAAAGTA
TTACCAGGAACAATAAGCAACGGTCAAGCTAATATCAGGAACCAAATTGACTCATCTCAT
CAAGAATGGGAAGGTTTAGTGTCATTTATCAATAAAACTATCGAATCATTGGAAAACAAG
ATACAACAATGGAATGAATATGAAAATATGAAAGATCAATGCTTGATTTGGATAAGAAAT
ACAGACACGCAAATTCATGCGGTTGATTTGAAGGCAACTTTATCAGAAAAACAAGAGCAG
TTTAATAAATTCCAGGAGTTACAAGGCGAGGTGAGGGCAAAAGAACTAGAAATTGATAAC
ATAACTGAAAAAGCACAAAATCTCTACACCGGTGTTTTAGGTCCACGCGGGTCTCAGATT
TCCGATTTATCTGTAACATATCAGCCTTTGTCACAGAAAGTTAAAGATTTAAC
(893 bp)

- SilkBase 1999-2023 -