SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36497_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Usher_syndrome_type-1G_protein_homolog_[Bombyx_mori]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007605 P sensory perception of sound
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030507 F spectrin binding
GO:0032391 C photoreceptor connecting cilium
GO:0036064 C ciliary basal body
GO:0042472 P inner ear morphogenesis
GO:0042803 F protein homodimerization activity
GO:0045494 P photoreceptor cell maintenance
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0060113 P inner ear receptor cell differentiation
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:4.58 TPM:4.43
ORF EntryO_SariASG11912_5prime_partial:A_SariASG_c36497_g1_i1
Sequence
(Nucleotide)
GTGTGCTCTTCCGATCTTGGACGAGGTGGTGAGCCAGACAAAGCTGATTATTTCGGCAAC
ACAGCTCTCCATTTAGCAGCAGCGCGAGGCCACAAAGAATGCGTCACTTTCCTAGTAAAC
TTTGGTGCGAACGTATTCGCGATGGACGTAGACGGACACAGTGCGCAAGAATTAGCCGCT
ATAAACGCCAGAGAAGATATACTTCGATATCTGGACCAAGCTACGGGGAAACTAGAGAAT
AATGACAAAAAAAAAGCGAAATCTCTAAAGGAAAAGGCTAAAAAGGATTACGAAAAAACT
CAAAAGCTGTATCAGAAACGACAGAGTAAGGCGGACTTGATGGCGGAGAAGGAATTGAAG
AAATTAGCAAAGGAGTGGGACCAAGGGTATAATGAGGATGGTTCCATAATGCCCCATCGG
CCTAGCAACGTGCTGATCACGCTCAAACATAAAATGAAACGATCCACCAGCCAAGGTAAC
CTATTAGCGGAGGAAGCGCCTCGTACGACTTACAGCTCGTTGGTAGGGACCATGAGCTCG
GGGGTGCGGGGTCGGGGCGCTGTCCAAAAGAAAGTGCTCGCCAACAAGTTGCGCAACAAT
ACGGTCGGACGGAACGGGCCTAATACCGATTTTAAGGTAGGTGAGATAGAAACGACTGGT
CGGCGCTCTGTGACGTCACTCAGCGGTCTCCAGCGCGACACGGAGGTTATGTTCGTGGGC
ACGCTGGGCGCGGGCCCGCAGCAGCGCGGGAACCTCGCCGACGTCTTCACAGAGTCCAGC
AATGAACCTAGGAAACCGCAACTCACCAGATCTACGAGCCAGCCGGATTTCACCGCGGTG
CCTGTGGAGGACAACGGTATTGGGCAAGAGGTGATGCTGCAGGAACGTGCCAGTATATTC
GAAAGAC
(907 bp)

- SilkBase 1999-2023 -