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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36486_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		TOX_high_mobility_group_box_family_member_3-like_isoform_X4_[Helicoverpa_armigera]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0034056 F estrogen response element binding
GO:0042803 F protein homodimerization activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051219 F phosphoprotein binding
Transcript
Level		FPKM:1.27 TPM:1.23
ORF EntryO_SariASG11881_5prime_partial:A_SariASG_c36486_g1_i1
Sequence
(Nucleotide)
CTGCTCTTTTGTAATAATTTGTTTACTATCCAATATCTATTATAAACTTCTACAGTATAT
TTTAATGCGTGTTATGTACGTCTCTAGAATAAATTCTAAAGCATATAATATGTCAGAGTA
TATAAGATTGTATTGTAAACAAACCACTGATAACATCATTGTTACGTATGAATGGTGTTT
ATCATAAATGAATGGTTACTTTACCTATATGCCTGCTTTATTTTATAGAATAAAAATTAA
TGTAACATATGGTTTTTAGGTTGGCATGATGAATCCAGCACAAGATGGCTTGGCACCGCC
GGGTGGCGCTCCCTCATATCAACAACCTCTATATTTACAAGAACCGCACACGCCTGTGAC
AGCACATGGTGGTGCAGGTGCTCCGGCAGGCAACTACATAATTCAACAGCAGCCTGGTGG
TCAGCAACGGCTTTTGATGATGCAACCAACTCAGGTGATGAGTGGCCCACCTACACCAAA
TACTCCAACTCAAACCAATGGACCAGTTTATGGATCTCCTCAGAGAGCATCACCACCAGG
AACTACTAGTGATGACTCGGATGACAGTGTACCCTCCCATCATTCACAGTTGCCTGGTGA
TGCGGAAAGCCTTCTGCCTATCCATTATTGCTCAGCGAGCCGGCAGCAACAAACTACGCT
TCATCAGATTAGTGTCGGAACAATGGGTGTTAAGAGGTCTTCGCCAGAACCAATGGATAA
TGGGATGACTCGAGGACAGATGCAAAAAAAGCCTAAAGTGCAAAAGAAGAAGAAAAAGAG
AGATCCAAATGAACCACAAAAACCTGTATCAGCGTATGCATTATTTTTTCGAGACACGCA
AGCCGCAATTAAAGGACAAAACCCAAATGCAAGCTTTGGAGAGGTCTCTAAGATTGTCGC
TTCCATGTGGGATGGTCTGGATTCAGAACACAAAAGTGTATACAAACAAAAAACAGAGGT
TGCAAAGAAAGAATATTTAAAAGCATTGGCTGCTTACAGAGCTAGCTTGGTATCGAAGGG
CGGTGAACAAGAGAATCCAACAATGTACAATCACTCGAACAATGCCAACTCAACCTATGG
CAACTATTACCAAGGCCAGTCCTATGGCAATGGTCATTCCCCACAAGCTTACGTACCAAA
TCAATCGCCACAGGGATATGCATCACCTTACTCGGGACAGTCCGTTCAGACTTACCCGAC
TAACCCCCAGCAATCGCCTCAAAACTACCAAGCCAATATAACACTTGCTTCACAAACTTA
TCAGGGTGTACCAGGCCAATCTCCACAGGGGTACCAAGTAAATTCTGCAACGTCGCCACA
ACCTTGCCAACCTAGTGTACAACAATCGCCGAGAAACTACCAACCTTCTCAGTCACCGAC
AAATTACTCTGGCAACTCGGGGATTTCGCCTCCAGGTTATAGGCAGGTGCAACCACAGTC
ACCACCAATGTCGCAGGTTCATACGGCTATGCAGTACCATCATAATCAACAGTCTATGCA
AACTACGCATCAACAAATGCAACAAGGACATCAGGTGCAACAATATCAACAACTACAGCA
ACAGCAGTTGCAACAACAGCAGCAGCAACAACAAGAGGCGAAAAACAAAAAGGCGGACGT
GGTGAAAAAACCTGAAACGCCCAAATTCGAGACGGCCACCAAAAAGACGGATAAAAAACC
CGAAACGAATAAGAAAGTCGAGCCGGTGGCTGTGAAGAAAAAAGAGGACAAGAAGGAGAA
GAAACAAGAGAAGTTGACGGAAAAGAAGAAGGAGAACAAACATGAGAAGAGCGCGACACC
CACCGTCAAAGAGAACAAGCAACCCGCCCAACAACAACAAAACAACAACGCGAACAATAA
GAAGGACAAGAAAAAGGACAACCAACAACAACAACAACAGCAACAG
(1906 bp)

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