SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36432_g3_i2
Scaffold_id
NCBI non-redundant
(nr)		bestrophin-4_isoform_X2_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005254 F chloride channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005929 C cilium
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0007608 P sensory perception of smell
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034707 C chloride channel complex
GO:0051899 P membrane depolarization
GO:1902476 P chloride transmembrane transport
Transcript
Level		FPKM:10.34 TPM:10.02
ORF EntryO_SariASG11770_complete:A_SariASG_c36432_g3_i2
Sequence
(Nucleotide)
CGCAAAAGTCTTTCAAGTTTCAATACATCTCGATTCTCGACGACGACGAGTAGGTACGCG
AGTAGTGAGTAGATTAGTATGTGTGAATTTCGCTACTTTTGTGATTTGCAAATGTAAATG
TGCCGAATGAACGCAAATATTGTGCATAATTGATATTATCGTTTTAAACAATAGTTTCAT
GTGAATCAGTGACTGAACTAGTTATAGCAAAGACTAGAAATAATGTTTTTTTGTGTTTTT
AATTCAATACATTTTACAAAGTTTTCTTGATGATTATATACATTTTTCACGTCCATCACT
GTGATATTATAAATTAGCGCATAAAATTACTAAAATGACTGTAACATATACCGGGGAAGT
TGCTACTTGCCGTGGATTCGGCACTTTTTTGAAGGTTTTATATAGATGGCGAGGGAGCAT
ATACAAGCTTGTCTGGTTGGACCTCCTTGTTTTCCTACTATTATATTATGTCCTCAATTT
GACATATCGTCTACTTCTAGATGAAAATTCTAAGAGGATATTCGAAGGCATTGTGAATTA
CTGCAGCATGCACGGCAACGTGATCCCTTTATCATTCGTATTAGGGTTCTATGTCACTGT
CGTTATGAATCGTTGGTGGAACCAATACACGACTATACCTTGGCCTGACTCCCTCGCCGT
CTTCGTTTCGGCCACCATACATGGACAGGATGAGCGCGGGCGTCTGATGCGACGAACAAT
CGTGCGTTACGCCTGTCTGTGCCTGACAATGGTGCTAACGATGATCTCACCACGTGTAAA
GAAACGTTTTCCTACACTCGATAACTTCGTTGAAGCTGGCCTGTTGAATGACAACGAGAA
AACAATACTCGACAATCTTAACCAAAAGTTTCCGAAACCCTCGAAACATTGGTTACCAAT
AGTATGGGCTACCAGTATAGTCACAAGGGCCCGCAAAGAGGGTAGAATAAGGGACGATTT
TGCAGTAAAAACGATAATAGATGAATTAAATAAATTTAGAGGGCAAGCTGGACTTCTCCT
CAGTTATGATACAATAAGCGTTCCGCTCGTATATACTCAGGTAGTTACCATAGCCGTGTA
CTCGTATTTTATAACCTCAGCACTAGGTAGTCAGTGGATTGATAATAAACTGAAAGTATC
CCGTAGCGATTCGACCGTTATAAGTAACGTAGACCTTTATTTTCCGATATTTAGTACATT
AGAATTCTTCTTCTACATGGGCTGGCTGAAAGTGGCCGAGTCGTTAATAAACCCATTCGG
CGAAGACGACGACGATTTTGAAGTCAATTGGCTTATCGACAGAGATTTGCAGGTATCGTA
CATGATCGTGGATGAGATGCATCACGAGCATCCGCAATTGATTAAAGATCAATATTGGGA
CGAGGTGTTCCCGTCTGAGTTGCCATACACTATAGCTACTGAGAACCAGCGCGAGGAACA
TCCCGAGGCGTCCACAGCTCGCGTTGCGGTGCCGGTCCGACAACGCAGTATGGTGATGGT
CGCCCCCTCATCCGTTAAGATCGACGAGATGGTTCCATCCAACACCCAAATACAAATGAA
CGACGATGCGCAGTCTGGTATTCACTTTATGGTCCACCGTGGTAGCACCAAGCGGAAAAA
GGAAGACAGAAACTCTATGGGTTCCTCGAATTCAATGGCGTCACTGCAACAGACGCCGAT
GAATAGAACCAATTCAGTCACGTCCATGTTGAAGAGATTATTCTCGAAGGAGGACCAGAG
ACAACAACCAACGTCCGCTGCCAACCAGACTGATAGCGGAACCCGGTTTATGATATCAGC
AAGTAATCCTACACTGAACAAGCCGGCTACTGCAGGCGGTAGTATGAAGATAGCCAACGA
AGTCATAGAAGAAGTCGATGAACAGGCCACGATCACTAGTATGGCGAAAAAACCGGAAAG
CAGGCCCACAGCAATGAGTTTATTCGCTCAAAAACCGACAGCACCAAGCGACCCAGTTAA
GGTTCCTTCTCGGAATTCCAACCACAGTTCTAACGACACTCGGTTGTCTCGGTCGGCGCC
GAACGAGTGGGAGATGCCGGGGAGGGACGCGCGGGACAACGGTAACGTCGGTGACAAGAG
TCCCGCCGTGCAGTCGCTCGACGCGGACGCGTCCTACACGAGCGTGGCGGACGAGCGTCG
CCCGCGACTCGACAGCGACGTCGGCGCGTCGCTCAGCGCCGCCGGCAGTCAAACACTTCT
GGACGAAGGTGACGGTGAAGATGAACCAGATTTGGACGATTTCGATCGCTTGCGCAGTAT
ACGCGAGCAGCATCGCCGCGAGAAACATTTACAAAAACTTATGGCACGTTCAGTGAGCGC
GCAACAGCGAACAGGAAGTGTAGAATTAATTGATAATGACTTACTATTAGAAGATTTATT
GACGCAATCGAGGGCCTTAAGGAAAGAAGAAAATAAGAAAAACGACATTAAAGATGAAAC
CACATGACACAGCCGAAGTCTCATATTTATGTGGGATTAATAAATATGGACATTTCAGTA
TTAGAAATTGTGATACATTTACTTTTTAAGTACAGCGAATGTTGTAAACAATGGTGTTTA
ACATATACAATTGATAAAGTAAACTAATTAACTAGTTAAAAAAAAAAAAAAAAAA
(2635 bp)

- SilkBase 1999-2023 -