SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36366_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		RNA-binding_protein_39_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:4.87 TPM:4.71
ORF EntryO_SariASG11680_complete:A_SariASG_c36366_g1_i4
Sequence
(Nucleotide)
CCCTCCCCTATAATAATTGAAAACGTGAAAACACTTCTTCGGATCAAGACGATTACCTAT
AATTGTTTTGCATGGGTATTATAGGCTTTTACAAAGGCCACGAATTTGGTGAAACCATAT
TGATTATTATTTTGTGCGCTTTTTCTAGAAAGTCAGAATGGCTGAAGATTTTGATGTAGA
GGCTATGTTAGAAGCACCCTATAATAAATTTAACTTTGTGGTAATAGTCCAGCATACTTC
ACCAACCTGAACAGACAGAGAGGATAACACTTCCACTTCAAAGCAACGAACGGACAAGTA
CACCGATAAGCACAAAGAAAAGGATAAAGAAAGCAGTAGAAGACGCAGCCGGTCAAGAGA
TAGAAGAAGATCAAGAGATAAAGATTCTCAACGTCCAAGAGACAGAGATGATAAGAAAAA
TAAAGAACGTGAAAAGGAAAGGGACCGTGAACGTCGTGATCGGGATAAAGATCGCGGACA
CAGAGATAAAGAACGTGAAAAGGAAAAAGATCGTGAACGAGATAAAGACAAAGATAAAAG
ACGGAGCAAGGATAAAGAACGTAGTCTTGAAAGAGACCGTAGTCGTGACAGACATTCTCA
TAAAAAAGATAAGAGTCTGGAAAAAGAAGCCCATAAAGATTACCGTTCAAAATCAAGAGG
ACCTGAACCAAAACTAGAAGATTTACCACCTGAAGAAAGAGACTTACGGACTGTGTTTTG
TATGCAGTTATCTCAACGAATTAGGGCAAAAGATCTTGAAGAGTTCTTTTCGTCTGTTGG
TAAAGTTAGAGATGTAAGAATGATTACATGCAACAAGACTAGAAGATTTAAAGGGATTGC
TTACATCGAATTCAAAGACGCAGAATCAGTGCCACTGGCATTAGGATTAACTGGACAAAA
GTTACTTGGTGTCCCAATCATTGTTCAACATACGCAAGCGGAAAAGAACAGAGTAGGCAA
CACGCTGCCAAACTTAGCACCAAAAACTAGTAATGGACCTACCAGATTGTATGTCGGTTC
GCTTCATTTTAATATTACAGAAGATATGCTTCGAGGCATATTTGAACCGTTTGGGAAAAT
CGATCACATACAATTAATGACTGACCCGGAGACGGGCAAAAGTAAAGGATATGGATTTCT
TACATTCCATCATGCAGCGGATGCTAAGAAAGCAATGGAACAACTGAACGGTTTCGAATT
GGCAGGACGACCTATGAAAGTAGGTAATGTGACGGAACGGACAGATGGTGGGTCTAGCAC
TCGCTTTGATGCGGATGAGTTGGACCGAGCAGGCATCGATCTTGGAGCGACAGGCCGTTT
GCAGCTGATGTTCAAGCTTGCAGAAGGAACAGGTTTACAGATTCCACAAGCTGCAGCGTC
AGTATTAATAGGAAGTAGCAATGCTCTCGTGAATCCACAACCGCAAGTGGCGCCTCCCAT
AGCAACGCAGTGTTTTATGCTTAACAACATGTTTGATCCAGCTTCTGAGAATAATCCGAG
CTGGGATATCGAGATTAGGGATGACGTCATCAGTGAGTGTAACAAACACGGCGGAGTGTT
ACACGTTTACGTGGATAAAGCGTCGCCTCAGGGGAACGTGTACTGCAAATGTCCCACGAT
AGCGACCGCCGTAGCCTCGGTGAACAGTTTGCACGGACGGTGGTTTGCGGGTCGCGTCAT
CACGGCGGCATATGTACCACTCGTCAACTACCATTCACTGTTCCCAGACGCAATGACAGC
ACTCACATTGTTACTGCCTACGCGACAACGATAACTACCCGATTTGGGTACGCGTTAAAT
ATGCACCCAATATATTAAAGTGGGACACGGAAAACTTGAGTGTGTACTGTTTTGTATATG
AAATACATAATTCTAGCAATATCATAAATAAAATAAAAAAATAAACCATACTGTAATTTC
ATTTTATTATATTATAATATTGTTTTAAATAAAGCCTGCTATTTTAAAAAAAAAAAA
(1977 bp)

- SilkBase 1999-2023 -