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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36140_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		transcription_elongation_factor_SPT5_[Helicoverpa_armigera]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000176 C nuclear exosome (RNase complex)
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007052 P mitotic spindle organization
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007549 P dosage compensation
GO:0008023 C transcription elongation factor complex
GO:0032044 C DSIF complex
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0032785 P negative regulation of DNA-templated transcription, elongation
GO:0032786 P positive regulation of DNA-templated transcription, elongation
GO:0035101 C FACT complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
Transcript
Level		FPKM:17.40 TPM:16.85
ORF EntryO_SariASG11389_complete:A_SariASG_c36140_g1_i1
Sequence
(Nucleotide)
GTGAACTGTCAGATTGTTATTGTCGATGTTAGAAACAGACTAGTAATGTTAGAATATTTA
TTTGGTTGTGTGACATGGATTTAGATTTTTGAAATTACCTATGTGGATCAAAATCATTGA
AATATATCGTTTAGAGTGACAATGTCAGACTCAGAGGCGAGTAATTATTCAGGGAGTGGT
TCAGAGGCTGGCAGCGTGGCTTCCCGACGTTCTCGTCGAAGTGCCGCGTCGAATCGTTCC
GCGAAATCTCGTTCTGTAGAATCCAGATCCAGATCACGGTCTGGAAGCCGCAGCATTTCC
AGAAGTCCCTCCAGATCACGCTCCAGATCGCGATCTCGTTCACGATCGCGCTCTAGGAGC
CGTTCTGTCGCATCGGAAGATAGCCGCAACAAAGATGATGAAGCCAAAGAAGCATCAGGT
GATGAAGAAGTGGAGGATGAACAGGAACCAGAGGGGGAGGACCTGGTGGACTCTGAAGAA
TATGAAGAAGACGAAGAAGAGGAAAGGTTAAGAAAGAAACGCAAGAAAGACAGCCGCTAT
GGAGGATTCATTATAGATGAAGCCGAGGTGGACGATGAGGTTGATGAAGATGATGAATGG
GAAGAAGGAGCACAAGAAATGGGTATTGTTGGGAATGAAGTAGATGAAATAGGTCCAACT
GCTAGGGAAATCGAAGGGAGAAGGCGAGGCACCAATTTGTGGGACTCACAAAAAGAGGAA
GAAATTGAGGAGTACCTCAGAAATAAATATGCTGATGAGACAGCAGCTCACAGACATTTC
GGTGAAGGGGGAGAGGAGATGTCTGATGAAATAACACAGCAAACTCTATTGCCTGGTATC
AAAGATCCCAATTTATGGATGGTGAAGTGTCGAATTGGAGAAGAGAAAGCCACAGTCTTG
TTACTCATGAGAAAGTTCATTGCATTCCAAAATTCACAGGAGCCCTTTCAGATCAAATCT
GTTGTTGCACCAGAGGGTGCCAAGGGATATATATACATAGAAGCCTTTAAGCAAACACAT
GTAAAAGCTGTTATTGATAATGTGGGCACCCTTAGAATGGGTGTGTGGAAACAAGAGATG
GTACCAATTAAAGAAATGACTGATGTCCTCAGAGTCGTTAAGGAACAAACAGGCTTAAAA
CCAAAACAGTGGGTCAGATTAAAAAGAGGATTGTATAAGGATGATATAGCTCAAGTTGAT
TATGTAGATTTGGCACAAAACCATGTTCACTTGAAACTGTTGCCTAGGATAGACTATACG
AGACTAAGAGGCGCTCTTAGAACACCTCAAAGTGAAAGCGAGGCGGCCAAACGAAAGAAG
AAACGCCGCCCCGCCGCGAAACCCTTTGACCCTGAGGCGATCCGAGGTATCGGTGGGGAA
GTCACTTCCGATGGAGACTTTCTCATCTTTGAGGGCAATAGATATTCTCGTAAGGGTTTC
TTATACAAAAACTTCACCATGTCGGCGATACTGGCGGAAGGGGTCAAACCGACACTCACT
GAGCTAGAAAGGTTCGAGGAGCAACCGGAGGGCATCGACATTGAACTCGCCGCGCCCGCC
AAAGACGATCCGACTAATTTGCACTCGTTCTCAATGGGAGACAATGTGGAGGTCTGCTCG
GGGGATCTCGCCAACCTCCAGGCTCGCATCGTCGCCATCGACGGGTCCATGATCACCGTG
ATGCCGAAGCACGACGCGCTCAAGGACTTGCTTGTCTTCAAACCGAACGAGTTGCGCAAG
TACTTCAAGCAAGGCGACCACGTGAAGGTGCTCGCCGGACGTTACGAGGGCGACACCGGA
CTCATCGTGCGCGTCGAGCCCCACCGCGTCGTGCTCGTCTCCGACCTCACCATGCACGAG
CTCGAGGTGCTGCCCCGCGACCTGCAGCTCTGTTCCGACATGGCGACCGGCGTCGACTCC
CTCGGCCAGTTCCAGTGGGGCGACATGGTGCAGCTCGACCCGCAGACTGTCGGCGTCATC
GTACGACTCGAGAAGGAAAACTTCCACGTGCTCGGCATGCAGGGCAAGGTGATCGAGTGC
AAGCCTCAGGCGTTGCAGAAGCGACGCGAGAACCGCTTCACGAAGGCGCTCGACTCCGAG
GAGAACACCATTCAGAAGCGCGACATCGTGAAGGTGATCGACGGACCTCATGCCGGCCGC
GACGGCGAGATCAAGCATCTCTACAGGAACTTCGCGTTCCTGCAGTCGCGCATGTACCTC
GACAACGGCGGCATCTTCGTCTGCAAGACGCGCCATCTCCAGCTCGCGGGCGGAGCGCGG
AACGGGTCCACGGCGGCGGGGGGGCTGCCGCTCGGGTTCATGTCGCCGCGCATCCAGTCC
CCCGCGCACCCCTCCGCCCGCGGCTCCTTCACGCCCCGCGGCCGGGGAGGGCGCGGCGGT
GGCGCCGGCCGGGGAGCCGCCCGGGACCGCGACCTCATTGGGCAGACTATCAAGATCACC
GGGGGACCGTACAAGGGCAACGTCGGCATCGTGAAGGACGCGACCGGGAGCACGGCGCGC
GTCGAGCTGCACTCCTCCTGCCAGACCATATCGGTGGATCGCGGACACATCGCGGGGGCG
GCGGGCGCGGGGGCCGCCGGGGGCGCCTCGTTCTACTCGCGTACTCCGTCACGCACTCCG
GCCGCCGGCGCCGCGACGCCCACGTACCGCGACACCGGCATCAAGACTCCGATGCACGGG
TCCGCGACGCCCGTGTACGAGGCGGGCGGGCGCACCCCGCACTACGGGTCCGCGACACCC
TCGCACGAGGGCGGGCGCACCCCCGCGCACGGCGCCTGGGACCCCTCCGCCGCCGCGACC
CCGGCCCGCGCTCCCGACTTCGAGTACTCCCCGTTGGAGGAACCCGAGGGAGGCTACGGG
TCGTTCGCGCCGCAGACGCCGGCCGCAATGTACGGGTCGGACCACACGTACAGCCCGTAC
CGGCCGTCGCCGAGCCCGTACCCGGGCACGCCGAGCCCCGCCGGGTACTCGCCGGGCTCG
CCGTACCGGCCAGGCACCCCGGGTGGGCCGGGCGGACCGGGCGGCGGGGACGTGCCGGCG
CCGGACTGGCACACGACGGAGGTGGAGGTGCGGGTGCGCGCGGGGTGCGAGGGCGCAGCC
GCGGGACAGGTGGGCGTCGTGCGCGGCCTCACGGAGGGCTCGTGCGCCGTCTACGTGCCG
GCGGAGGACCGCGTGCTGAGCGTGCCGGCAGACCTGCTGGACCCGGTGCTGCCGCAGGCG
GGAGACCGCGTCAAGGTGATCGCAGGCGAGGACCGGGAGGCGGTCGGACAGCTCATCTCT
ATTGAGAACCAGGAGGGCGTCGTCAAGTTCGGAACCGACGACATCAAGATCATGCAGCTC
CGGCATCTCTGTAAGATGAGCACCGCGTAAGCCGCTCACTTCTCTGGTGTATTTTTATTT
TGTTCAGCTTACTTGGAATCTGAGCTTCAGAAAGTCTATTGTTTACGTAGTAATATTATT
GCGTGTTTCTGTTATAAACTTTTGTTTAAGGACTCTAACAAATATAATTTAATCCTGATT
TTCCCGATCTCAATATTGAGTATCTCTCCCAGTAACTTTTAATCATATTTTATGACTAAT
AGTTAAAATTAATCAATATTACGTTATTTATTTTATACTTTGACGTACCTATAAGTACTG
ACAGTAGAATGTAGTATATTTCGACAAAGACTGGAAATCAGTTACAGACTATATATTAAC
TCGGACGGGGAGAGGTTGGCCCAATTCAGGATCTTTTATATATCTATAAACTAGATTAGA
TATGTGAAATAATATAACGCAGGATTGTCATTAATAATAGATAGGGGTCTACATGTCATT
TATAATAAATTATAATTATTAAAAAAAAAA
(3870 bp)

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