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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36112_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		signal_recognition_particle_54_kDa_protein_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008144 F obsolete drug binding
GO:0008152 P metabolic process
GO:0008312 F 7S RNA binding
GO:0016607 C nuclear speck
GO:0019003 F GDP binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
Transcript
Level		FPKM:78.64 TPM:76.15
ORF EntryO_SariASG11345_3prime_partial:A_SariASG_c36112_g1_i1
Sequence
(Nucleotide)
CCTATATGTACTGATTTGACGTGTTCGTTCGTCGTGTTCATCTCATGTCAGGTGTCTGAC
GATATTGTGTAGCTATAACAATTTTATTATTATTGTACATGGTAAAAATAATTAGTAAAT
GATCAAGCACATAAATGAATAACTGCTGATTTTTAGAGTTTTAATTATAGTTGTTATTTT
AAAATTCTCTATAAAATGTTACACGTATACAATAGTTCTCGATAATGACTTATAAATAAG
TAACAGCTGACGTGAAATTGAGAAATCTGAGAATTTGTGAGGCGACAACATGGTATTAGC
GGACTTAGGTCGTAAAATCACCACAGCCCTGCAATCCTTGAGCAGGGCAACCATCATCAA
TGAAGAGGTATTAAACTCTATGCTAAAGCAGATATGTGCTGCTCTCTTAGAAGCAGATGT
CAATATTCGTCTGGTAAAGAATCTTAGAGAAAATGTACGTGCAGTTATTGATTTTGATGA
GATGGCTGGTGGTCTCAACAAACGTCGTATGATTCAATCAGCTGTCTTTAAAGAACTTGT
AAAGCTTGTTGATCCTGGAGTAAAACCTTTTCAACCAGTCAAAGGCAAACCCAATATCAT
CATGTTTGTAGGACTCCAGGGGTCTGGGAAAACCACAACATGTACCAAACTTGCATATCA
CTACTTGAGAAAGAATTGGAAGTCATGTCTTGTGTGTGCTGATACCTTCAGAGCTGGTGC
CTATGATCAGGTTAAGCAGAATTGTACCAAAGCCAGGATACCGTTTTATGGAAGTTACAC
GGAAGTCGATCCTGTTGTAATAGCAACAACTGGTGTTGAAATGTTCAAAAAAGAGGGCTT
CGAGATGATAATAGTTGATACTAGTGGTCGTCACAAACAGGAAGAGTCATTATTTGAAGA
AATGTTGGCAGTCGCTAATGCAATTAAACCAGACAATATTATTTTTGTTATGGACGCTAC
AATTGGGCAAGCGTGTGAGGCTCAAGCAAAAGCCTTTAAAGAAAAAGTAGACATTGGTTC
AGTTATAATCACAAAGTTAGATGGACATGCTAAAGGTGGTGGTGCACTTTCAGCTGTTGC
TGCTACACAGAGTCCGATCATTTTTATTGGTACTGGAGAACATATTGATGACTTGGAATC
TTTCAAAACGAAACCTTTTATTAATAAATTACTTGGCATGGGTGACATTGAGGGACTTTT
GGACAAAGTGAATGAGCTTAAATTGGATGATAATGATGAGATTTTAGAAAAACTCAAGCA
AGGACAATTCACGCTTAGATCTATGTATGAACAGTTTCAAAACATAATGAAGATGGGGCC
CTTTTCACAAATTATGGGTATGATTCCAGGATTTTCTCAAGATCTTATGTCTAAAGGAAG
TGAACAAGAATCGATGGCAAAATTAAAGAGGCTCATGACTATAATGGATTCTATGAATGA
GGGTGAGCTTGATCATCGCGATGGTGCTAAACTTTTCACAAAACAACCCACTCGAATCTC
GAGGGTCGCACAAGGTGCAGGAGTTACGGAAAGAGATGTAAAGGATTTAATTTCACAATA
TACCAAATTTGCTGCGGTAGTCAAGAAAATGGGTGGGATTAAAGGGTTATTCAAAGGTGG
CGATATGGCTAAAAATGTCAATCAGACTCAAATGGTTAAACTTAACCAACAGATGGCTAA
AATGATGGACCCAAGAATTCTACAGCAGATGGGTGGCATGAGTGGACTTCAAAACATGAT
GCGGCAATTACAACAGGGCTCTAGTGGCATGAATAGTTTAATGGGCGGAGATCGGAAGAG
CGT
(1803 bp)

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