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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36075_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX17_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
Transcript
Level		FPKM:7.37 TPM:7.14
ORF EntryO_SariASG11305_complete:A_SariASG_c36075_g2_i2
Sequence
(Nucleotide)
AATGTTGGACATGGGTTTTGAACCTCAAATAAGGAAAATAATTGAGCAAATTAGGCCAGA
CCGTCAGACATTGATGTGGTCTGCCACTTGGCCCAGGGAAGTACAAAGCTTGGCTTCTGA
GTTTTTAAAGGACTACCTTCAAATCAATGTAGGTTCTTTGCAATTGGCTGCTAATCATAA
CATATTGCAAATCATTGATGTTTGTATGGAATATGAGAAGGAAACAAAGCTGAGTACACT
CCTTAAAGAAATTATGGCAGAAAAAGAAAACAAAACTATAATCTTCATTGAAACAAAGAA
GCGTGTAGATGACATTACTAGAAAGATGAAAAGAGATGGATGGCCTACAGTATGCATTCA
CGGAGACAAGTCACAAAATGAGAGAGATTGGGTATTGCAAGGTAAGATTAACACAAAGGG
CTCCAGGTAACAACCACATTTTGTATTTCATTCAATTTTATATTTTATAAAATTGTGAAC
AACACTTAAACCTTTATATGGGTTTGAAATTTTATTGATACATTTAAATGATCAAGATAT
TGTGGTTGAGGTGATAGATGTGGGCGTTGAGAAGCGGCATCTGACTAGAGTTTCGTAGTG
TATTATTTGAAGAGTCATGTGCATGTGCAGGCGGCGGGGAGCTGCGGGCGGTGGCGGTCG
CCGCCTGCGCCTCTAGTTGTCGGGGCTAAGCCCCATGCACTGTGACTCGATCGCGGGCGG
TCGGAGCCGCTTCTCGCGCGCTGCACGCTGCGCGTTGCACGCAGCGCGTCGGTCCGGCGA
GGCTGTCCCTCGCGGGCCGCGGACGCAGCGCGTGCACGTAGCGCAGTAAGCCACGGTACC
CGCGCCGGCCGAGCCTCGTGCTGGCCTCCGCCCCCTCGGCGGCACACAGCGCTCAGTGCC
CACTGCCCAGTGCCCTCTCCTCTCGTCTCACTCTCTGTTCTGTTTTATGTGCACTAGCCA
CCCTCACCACTGTCGTCGAATATTTAGTTAGTAATTTTCGAAGTGGCAAGGCACCTATTC
TTGTAGCTACGGATGTGGCAGCTAGAGGCTTAGATGTCGACGACGTTAAGTTTGTCATAA
ACTTTGACTACCCAAGTAATTCAGAAGACTATGTCCATCGTATTGGAAGAACTGGACGTA
CAAATAAAACTGGAACAGCTTATACATTCTTTACACCATCCAATGCTGCCAAAGCAGGGG
ACCTTATGGCTGTGTTAAAGGAAGCCAAGCAAGTTGTTAATCCTAAACTACAAGAGCTTG
CTGAACGTGGTAGCGGCGGTGGGCGACGTCACCGGGGTCGCGGTGGGAGGTATCGTCGCA
GTCGCCGGTCCAGGTCGCGCTCGCGTTCGCGCCGTCGTCGGAGTCGCTCGAGGTCCAGGT
CCCGCGATCGTGACCGCGACCGACGTCGTCGCCGTCACAGCTCCTCCAGGTCGTCACGTA
GCCGATCATCAAAGTCTTCAAGAAGTCGATCGCGTTCTCGTTCCCGTAGTCGATCACGCT
CAGGCAAGTGCAGCCCTGTGAAGAACTCTACGGAATCTGTGTCACAGCAGGCACCACAAA
CTTTGCTGCCGCCGACTAAACCTCTCCTACCTACTCCCATTGGTCCACAGCTTCCATTGC
ATGACAAAATAGTTGCTAAACGTCCAACTAGTCCGGCCAATCTTTCAAATTCAGTTCAAA
GAGATATTCGATCTGACAAAAGTCCCCATCAAAATAATTTAAGTAATAATAACCCAATAC
CAAATCAACAGCAGCAACAAGAACAACATCCACCACTACCACCAAAACCTCCACAACCAC
CAATTAGTCAAATCCCACCTTTGATGGCTTTAAATCCACAAATGAACATGCCAGTCCCCC
TTGCACCTATGAATGGGCCACCTCCTTATGTTATGCCTCCATTTTATCCTCCCGACCAGT
ATGGAATGATGATGCCCAATTTTCCTGGGCCAATGCTTCCGAATGCAAACTGGGCTGCTC
CCCCGCCACCACCGCCACCTCTTCCTCCACCCCCTCCTCCGACATCTGAGAATCCTACTA
GTTTAAATCATGGGAGAGGTTCGGCGCAAAGTGGACAAGATTCAGATTCCAGAAAACGCG
GAGCTCGCTCTGGTGGGTTCGGTGATTCCAGCAATTATGGGCCTTCCTCCGATGGGCCTG
GTTCGGGCAGAGGCCTGGGCTCAAGCGGCGGTCTCGGCTACGGAGGAAACTCGGGCTCTG
GCGGAGACTTCGGTTCGGGCGGAGATTTCGAATCTGGCGGATGCTTCGACTCCGGTGGAG
ACTTCAATTCTGGTGATGCCTTCGGCCCTGGCAGGGGCTTCGGGACTGGCGGAGGCCTAG
GCTCCGGAGGTGGGCTCGGTTCCTCCTGGGGCCCCGGCGCTGACTCTGGCGGCTTTCGTT
CACGGGGTCGTGATAGACGACGTCGAGGACGAGGGCGAGATCAGGAGGACTATGACTCGA
GCAAACCGAGTTCTGGCGGCTTCGGGTCCTATGGACTCGGGGGCTCTGACGGCGGTCTGG
GTTCTGGCGGTCACGACGTACCCCACGGGAGCCAAATGCCGCGCATGCTCCCACAAAATA
GCGGTGGACCTCAGGGCGCAAACTTCACGGCTTTCGGCTCTTATGGGCCAAAGAACAATA
GACGGAATAATTATTCAGATGAACCTAACGAACATTACAATAATGGTCCACGTAAGAATA
ATGCGGAATATTATGGTCAACAAAATATGGGTCCCGGTCGGCCGTACTGTGCCGGCATGG
ACCAGAACGGAATGGGTATGTCGCAGGCGAACGGCTCCGGGGGGTACAATGACCGCCAGA
GGAATCACCGACTGTGAACAACCGAGAGAATGCACACAACGGTGATTCGCGGCGACGTAG
GAGACGTTGAACAGCTGCTAGTGCTGATCTAAGAGCTAAGGAAACAAACATAGTTTAAGT
TAATGATTTGACTTTTTTAAATCCCATTCCGCATGTGGTTCTTAGGACTGTTAAATGTTA
GCATTTTATGTTATAAACAAAACATATTTTGGTTTATAGCCAACGTAGCAGGAATATATC
TTTCGATCAGATTTCAAATACTTTTAAGCATTTGTGAATCTTCTCATCCGTTTTGTAATC
CTAATACATTTTTTTATTGTTTAGAAGTTTAAAAAAGTGATCATCAATGGATAACAAATA
TAAAAAATATTCATTGACAACAACCAAAGCATAACCAGGCTTCATAATTTTTTAAAGCTT
CTCAATAGTTTTGCATAGAAAGTGTTCTGTAATATGTATTATGGAACTTTCATGTTTTGT
TTATTTAGTAATTTTTTACCTCTTTCTGCCGGCAACAGTGCTGTTTATCAGTTTGGTATT
GCAGTCTGTATCGATTTATATACAAGTTTGATTTCCTAGATTTGTTAAAATACCCTAAGT
CTGTGTCAATATTCATTCATGGCTGTTATTTCACAGCCATAGCAATATCCTTTTCTTCAG
TGATGTACCCAGTTGACTTATATGTGGTACTTGAGTATTTCATTACAACTGCTTAAAAAA
ATACAGAGAATTAAGGCGCTAGAGTTGTTATCAAACCCAATTCAAAATATCAGGTTGACT
TTTAAATAATGCTCTTATTATCTCTTTAGGGCACTTACACATTGAAAATACATAAACTAC
TAATATGGTTAGTACAAAGATACTAATCTTGGAGATCGG
(3699 bp)

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