SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36056_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_cytidine_and_deoxycytidylate_deaminase_zinc-binding_region_[Operophtera_brumata]
Ontology
GO:0003824 F catalytic activity
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0008270 F zinc ion binding
GO:0009451 P RNA modification
GO:0019239 F deaminase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.30 TPM:2.22
ORF EntryO_SariASG11252_3prime_partial:A_SariASG_c36056_g1_i1
Sequence
(Nucleotide)
GTTTTGTATAATGATACAGTCTGATAAATGTTAATTTTTCATGGCTGCTAGATATTAGTG
GTTTGTGTGGCATAATATTCGTAAATACAATTTTAATCAAAAACAACTGTGCTATCAATT
TAAATTCCTATATCCAACGAAACGTACACGATCTACTTTATTATTGTGAAGATAAAAAAC
GTCACCTGCACAGGATTAACAGATAATACTCTACTCACAAACAGTGAGAAAGCGCCATCT
GATTCTGGTTTGGAGCATGATGTCTGAAAGAATTGAACCACCACCAGTTAAAAAAGCTAA
GATGGCTGACGAAATAACCATAGATAATCTGATAGACAACATAACAAACTCTGAGAAAAA
TCTCCAAGCTATTCTAAATGATGATTTATTCAAACCAATACCTCTTATTAAAGTGTACAT
AGGTCATGTAAAGGATCCTAAAGATATTTCGAAAATATTTAAAATTTTAAATGATAAGAT
ACCTCTAAAGGAACTCCATCACTTGAAGAGAGTAAGGAAAAGAGATGTGTTACTGTGTCC
TACGAATTTTTTAACACAAGAGTCTATACAGGAGTATATTGAAGAGAATGCTAATGAATT
GAAAGATTGTTTTGAATATTTCAAAGATGTTAATGTCCCTCTTAATCCACCTTTACTTAG
GAAGCAATATTTAGATTGCAGTAAGCATTGGTCAGTTAATTTTCATCCTAATAAATATCT
TGAGAGGTTGGTAAGTGATGGCTTTTTTAGTAATGATGAACTTCACGACCATAGAGTATA
CATGGGTATGACTTTGGAAGTTGCAAAATGGTACCTTGACTTGGAACCAAACTTAGATCT
TCAAAAGATTGTTATGAGTGATACAAATGTAGCGATTGTCGTTGATCCTGATCATAGATC
TGTAGTCGCCGTGGCATATGATAATAGAATGGAACATCCTTTACAACATGCCGGTATGTT
GGCCATAGATAATGTTGCTAAGACTCAAAATGGCGGCGTCTGGTCTACGGATATGGGAAA
TACATCCTTATCAGGATTAAAAGTTGATTTATTGATGCATTTGAAAAGTGTTTATCGTGA
TGTAAATTTTGGAGCAAAGAAATTTGTAAGCAAACGTGACGTAACTAATGGAAACAATTC
TGAAGGTCCTTATTTATGTACTGGATATTATGTGTATTTATTAAGAGAGCCTTGCGTTAT
GTGCTCCATGGGCCTAGTTCATGCAAGAGCTAAAAGGATTTTTTTCTGCTTTGATAATGT
AAATAATGGAGGCTTAAAGTCGAAGACTAAGTTACAATGTGTAG
(1304 bp)

- SilkBase 1999-2023 -