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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c36040_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		cold_shock_domain-containing_protein_E1_isoform_X2_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
Transcript
Level		FPKM:15.15 TPM:14.67
ORF EntryO_SariASG11212_complete:A_SariASG_c36040_g1_i2
Sequence
(Nucleotide)
GTGCTCTTCCGATCTGTTTCTTCTTGCCTTACACTAAAGATGATGTTGAGGGCAATGTAA
TTTTGCATACAGGTGATGCTGTTAGCTTTCAGATAGCCACAAATCAGAGAGGAACTTTGG
GTGCTTGTCATATACGTTTTGAAAATCCATCACACCCAGTGAAATACCATGGTGTTATCT
GCTCTATGAAAGAACATTTTGGTTTTATTGAGAGGGCTGACGTTGTAAAAGAAATATTCT
TTCACTATTCTGAAGCTAAATGTAAAGAAAAGTTGACTCTTGGTGATGATGTAGAATTTA
ACATTCATACCAGAAATGGCAAAGAAGTTGCTTGCAATATCAGCAAACTGCCAAGCGGGT
CGGTAGTTTTCGAAGATGTCAGCCCTGAAGTAATGCGAGGGCAAGTGTTGAAACCGTTGG
AACGTGGTAATATGGTCCGAGCAGTTCAAAACGATCCACTGCCCGGCCGACTCAGATACC
GTGCGGCTGATCATTCTGAAGTTGAGGTGCCATTTGGCGATAAAGATCAATGTGGCGAGT
TTACTCTACGCCATGGAGATTGGGTGCAATTTCAAGTGGCAACTGATAGGAGAGATCAGC
TTAAACGTGCCACCAATATATCTCTGTGGGATGAGTCTTTTAATGTATCAGGAGAACGAC
GGGAACAGGGGATTGTCTGTTCGTTGCGAGAAGGTTACGGATTCATCCGTTGCGTCGAGA
GAGAACAAACAATGTTCTTTCACTTCGCCGAAGTTCTCCGCTTGGGACAAGAACTTAGTG
TCGGAGATGAGGTGGAATTCACGGTGGACCCAGGGACAACATTTGCTAATTTAAACACAC
GTCAGTTTGCTATTCGCATAAAACACTTGCCCGTTGGTACAGTGCTATTTGAAACGCTGA
TCGAGCGAAGCGTACGTGGCGTTATCGCTAAGGAAGTCCAATTATTTACATCTTCATTAA
GCCCGGTCCGATCGGGATCCATTGACACAAACGGTCTGATTAATTGCGTAATTAATCAGA
CGAAGAAAACGGTACCGTTTGTCGCTAAGAATGTCGAATCTAAAATGCAGCCACGGGTCG
GGGACAAGGTTATCTTTGACCTGTATCAGGTGAAACGTACTAAAGAGTTGGTGGCAATGG
CAGTGCAAATTCAGCACAACCTTACCAATAATGGGAACGGTAGTAGCAGCGGCGCAGCTT
CGAACAGTCGCGCCGTCATGCATGGTTTCATTGCCGCCCTGAAAGACGGTTTCGGCTTCA
TAGAGGCATCTAACCACACTAAGGAAGTCTTCTTCCATTTCAGCAATCTTGAAGGCAGCC
CCGACTCCCTGGAATTGGGCTGTGAAGTGGAGTATACATTGGGGCGTATTATTAGCTCCG
GTGGTGGGTGTGCTAGCGCTGAATTCGTACGGCCTTTGTCGCGTGGCACAATACCGATAG
CAAAACCGTTGGAACCAACACTCTCCGGTACAATTACTAGAACTCTGAGAGCTCTTAACC
CTGATCAACCCCAGTATTCAGGAATGATACAAGTAGAAAATGGGACATCGTACGAATTCG
GTATAATGGGACTCGCGTGCAAACGTGAGATCCTGCAAGTTGGCGATCCGGTTACATTTC
AAGCCGACGTGGAGGGCAGGGCCACTAACATTGTGCCAATAAGAAAGAAGCGGCGTGCCA
TTGTCGATGCTATAAAAGGAGGTTTCGGTTTCCTGTCAGTGGAGGGGGAGGACAATCGCC
GTCTATTCTTCCACATGTCCGAAGTTCGCGGGAACCACTCCGATTTGCAGTCTGGTGATA
TTGTCGAGTTCGTCATGCTCACTAATCCCAGAAATGGGAAATCATCAGCTTGCAATGTCG
TTAAGATCGCTAGTAGACCGATCAGTAAATCCCGCGGTGAACGGCCGGAGCGGCTGTTGG
CCCGGCTGCGGACTCTGTCAATGGAGGAATCCGCCGGGCCGCGTGTTGTCACTTTACGTG
CTCCCCGCGGACCGGACGGTTCCCGGGGCTTTCGCCCACGTCGCCCCATTCCAGAATTGT
TACGCGAGTGAGATAGCGAGGCACGACCAAAACAATGAATATTGATACTGCATAACCGTT
AGCAGTATCAATAAACACTTTAGTTATTCGGTTTTGATTTCACACAAATTGTTTATTCAC
AAGAGACTGATTGATCCTTCTTTAGTTTAGCAGCATTTAGAAATTGTTTTGTTAATTTAT
TTAGTTCTATACAATAAACAATGGTATAATGATTAAAAAAAAAAAATTGATTCAAATAAA
TGTATTTTCATCGATGATTCATAATTGTAACACGTGTCACGGATGTGGCTTATGAGTAGT
AGTAATGAGCGGAGATCGGAAGAGCGTCGT
(2370 bp)

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